BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038953
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890110.1| CYCA2_3 [Arabidopsis lyrata subsp. lyrata] g...    57   1e-06
ref|NP_564499.3| cyclin-A3-2 [Arabidopsis thaliana] gi|75308808|...    57   2e-06
ref|XP_002891337.1| CYCA3_2 [Arabidopsis lyrata subsp. lyrata] g...    57   2e-06
ref|NP_564500.1| cyclin-A3-2 [Arabidopsis thaliana] gi|332194016...    57   2e-06
gb|AFK65510.1| cyclin A, partial [Dimocarpus longan]                   55   5e-06

>ref|XP_002890110.1| CYCA2_3 [Arabidopsis lyrata subsp. lyrata]
           gi|297335952|gb|EFH66369.1| CYCA2_3 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 450

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
 Frame = -3

Query: 283 PEIKAF--LYHDDPVALITALFAPGFSPEVYQNFRSIEMKEQWRPVPDYICKIQKDIDAA 110
           P+I  F  +  DD   L+  L+AP    E+Y N R  E+K   RPVPD++ +IQKD+  +
Sbjct: 167 PDIPKFVDIDSDDKDPLLCCLYAP----EIYYNLRVSELKH--RPVPDFMERIQKDVTQS 220

Query: 109 LRITVEDRSRAVRWLVQVTEMCYLGSDTLHRAVSLV 2
           +R  + D      WLV+V+E   L SDTL+  V L+
Sbjct: 221 MRGILVD------WLVEVSEEYTLASDTLYLTVYLI 250


>ref|NP_564499.3| cyclin-A3-2 [Arabidopsis thaliana]
           gi|75308808|sp|Q9C6A9.1|CCA32_ARATH RecName:
           Full=Cyclin-A3-2; AltName: Full=G2/mitotic-specific
           cyclin-A3-2; Short=CycA3;2
           gi|12325397|gb|AAG52639.1|AC079677_3 cyclin, putative;
           29287-27739 [Arabidopsis thaliana]
           gi|18086355|gb|AAL57640.1| At1g47210/F8G22_8
           [Arabidopsis thaliana] gi|21360411|gb|AAM47321.1|
           At1g47210/F8G22_8 [Arabidopsis thaliana]
           gi|21537145|gb|AAM61486.1| Cyclin, putative [Arabidopsis
           thaliana] gi|332194017|gb|AEE32138.1| cyclin-A3-2
           [Arabidopsis thaliana]
          Length = 372

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/66 (42%), Positives = 43/66 (65%)
 Frame = -3

Query: 205 EVYQNFRSIEMKEQWRPVPDYICKIQKDIDAALRITVEDRSRAVRWLVQVTEMCYLGSDT 26
           ++Y+  R +E+K + RP+PDYI K+QKD+  ++R  + D      WLV+V E   LGS+T
Sbjct: 105 DIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVD------WLVEVAEEYKLGSET 158

Query: 25  LHRAVS 8
           L+  VS
Sbjct: 159 LYLTVS 164


>ref|XP_002891337.1| CYCA3_2 [Arabidopsis lyrata subsp. lyrata]
           gi|297337179|gb|EFH67596.1| CYCA3_2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 368

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/66 (42%), Positives = 43/66 (65%)
 Frame = -3

Query: 205 EVYQNFRSIEMKEQWRPVPDYICKIQKDIDAALRITVEDRSRAVRWLVQVTEMCYLGSDT 26
           ++Y+  R +E+K + RP+PDYI K+QKD+  ++R  + D      WLV+V E   LGS+T
Sbjct: 101 DIYEYLRELEVKPKQRPLPDYIEKVQKDVTPSMRGVLVD------WLVEVAEEYKLGSET 154

Query: 25  LHRAVS 8
           L+  VS
Sbjct: 155 LYLTVS 160


>ref|NP_564500.1| cyclin-A3-2 [Arabidopsis thaliana] gi|332194016|gb|AEE32137.1|
           cyclin-A3-2 [Arabidopsis thaliana]
          Length = 192

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/66 (42%), Positives = 43/66 (65%)
 Frame = -3

Query: 205 EVYQNFRSIEMKEQWRPVPDYICKIQKDIDAALRITVEDRSRAVRWLVQVTEMCYLGSDT 26
           ++Y+  R +E+K + RP+PDYI K+QKD+  ++R  + D      WLV+V E   LGS+T
Sbjct: 105 DIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVD------WLVEVAEEYKLGSET 158

Query: 25  LHRAVS 8
           L+  VS
Sbjct: 159 LYLTVS 164


>gb|AFK65510.1| cyclin A, partial [Dimocarpus longan]
          Length = 382

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/71 (39%), Positives = 46/71 (64%)
 Frame = -3

Query: 214 FSPEVYQNFRSIEMKEQWRPVPDYICKIQKDIDAALRITVEDRSRAVRWLVQVTEMCYLG 35
           ++ ++Y+  R +E++ + RP+PDYI K+QKD+ A +R  + D      WLV+V+E   L 
Sbjct: 97  YATDIYEYLRDMEVEPKRRPLPDYIEKVQKDVSANMRGILVD------WLVEVSEEYKLF 150

Query: 34  SDTLHRAVSLV 2
           SDTL+  VS +
Sbjct: 151 SDTLYLTVSYI 161