BLASTX nr result

ID: Cimicifuga21_contig00038897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038897
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626523.1| hypothetical protein MTR_7g116830 [Medicago ...    68   7e-10
emb|CCH50966.1| T4.5 [Malus x robusta]                                 62   6e-08
ref|XP_003620829.1| Glutamate receptor 3.6 [Medicago truncatula]...    62   6e-08
emb|CAN80108.1| hypothetical protein VITISV_035396 [Vitis vinifera]    60   2e-07
emb|CAN77506.1| hypothetical protein VITISV_029387 [Vitis vinifera]    60   2e-07

>ref|XP_003626523.1| hypothetical protein MTR_7g116830 [Medicago truncatula]
            gi|355501538|gb|AES82741.1| hypothetical protein
            MTR_7g116830 [Medicago truncatula]
          Length = 1157

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/83 (42%), Positives = 50/83 (60%)
 Frame = +3

Query: 18   TSMATSIQIQNIHNLVPIKLSKDNYILWKSVWLPILRSYNLLPYIDGSKIFPQQFVRSTS 197
            +S A + Q  +I  +V +KL +DNY LWKS+ LP++R Y L  Y+ G+K  P QF+ S  
Sbjct: 844  SSAANTNQKNDIPTIVYVKLDRDNYPLWKSLVLPLIRGYKLDVYMLGTKACPDQFITS-- 901

Query: 198  ETGEVVSSLNPEFTNWIKQDQTL 266
              GE     NP+  +WI +DQ L
Sbjct: 902  --GETTKKANPDQDDWIARDQAL 922


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/84 (34%), Positives = 47/84 (55%)
 Frame = +3

Query: 15  PTSMATSIQIQNIHNLVPIKLSKDNYILWKSVWLPILRSYNLLPYIDGSKIFPQQFVRST 194
           P     +I I N+  +VP KL++ NYI W+S+++P+L+ + L+  ++G  + P  FVR  
Sbjct: 258 PIMTLGTISITNVAGMVPTKLNRQNYITWRSLFIPVLKRFKLIGLVNGEDLCPPPFVRDP 317

Query: 195 SETGEVVSSLNPEFTNWIKQDQTL 266
           S T       N  F  W ++DQ L
Sbjct: 318 SGT----CVPNASFETWCERDQIL 337


>ref|XP_003620829.1| Glutamate receptor 3.6 [Medicago truncatula]
           gi|355495844|gb|AES77047.1| Glutamate receptor 3.6
           [Medicago truncatula]
          Length = 408

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/81 (34%), Positives = 51/81 (62%)
 Frame = +3

Query: 18  TSMATSIQIQNIHNLVPIKLSKDNYILWKSVWLPILRSYNLLPYIDGSKIFPQQFVRSTS 197
           +S A +IQ  ++ + + +KL ++N+ LWKS+ LP+++   L  Y+ G+K  P+Q++ ST 
Sbjct: 2   SSAAQTIQKNDLPSTISVKLDRENFPLWKSLVLPLIKGSKLDGYLLGTKQRPEQYITSTD 61

Query: 198 ETGEVVSSLNPEFTNWIKQDQ 260
              +    +NPEF +W+  DQ
Sbjct: 62  PNSK---KINPEFEDWLAHDQ 79


>emb|CAN80108.1| hypothetical protein VITISV_035396 [Vitis vinifera]
          Length = 491

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/86 (36%), Positives = 49/86 (56%)
 Frame = +3

Query: 9   LLPTSMATSIQIQNIHNLVPIKLSKDNYILWKSVWLPILRSYNLLPYIDGSKIFPQQFVR 188
           +LPT+  + +   N     P+KL+  NY+ WK  +  +   Y+LL YIDGSK  P + + 
Sbjct: 9   ILPTTNESQLLTINTAAQAPLKLTSSNYLSWKIQFETLFIGYDLLGYIDGSKPCPPKTLT 68

Query: 189 STSETGEVVSSLNPEFTNWIKQDQTL 266
           + +     V +LNP +T WI+QDQ +
Sbjct: 69  TNN-----VDTLNPAYTLWIRQDQLI 89


>emb|CAN77506.1| hypothetical protein VITISV_029387 [Vitis vinifera]
          Length = 314

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/83 (32%), Positives = 54/83 (65%)
 Frame = +3

Query: 18  TSMATSIQIQNIHNLVPIKLSKDNYILWKSVWLPILRSYNLLPYIDGSKIFPQQFVRSTS 197
           +S ++ + +  + +++ IK++  NY+LW++ ++P+L S +LL ++DGS + P   V  ++
Sbjct: 5   SSSSSPLPLNTMVHMLTIKVTSFNYLLWRNQFIPLLTSQDLLGFLDGSVLAPSPQVTDSN 64

Query: 198 ETGEVVSSLNPEFTNWIKQDQTL 266
            T +V    NP +T+W+  DQTL
Sbjct: 65  GTTQV----NPAYTSWLTTDQTL 83


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