BLASTX nr result

ID: Cimicifuga21_contig00038877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038877
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39646.3| unnamed protein product [Vitis vinifera]              152   2e-35
gb|ADE76311.1| unknown [Picea sitchensis]                             141   5e-32
gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays]        124   1e-26
ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [S...   122   3e-26
ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containin...   120   1e-25

>emb|CBI39646.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  152 bits (385), Expect = 2e-35
 Identities = 64/78 (82%), Positives = 72/78 (92%)
 Frame = -3

Query: 234 MPFPKYYCDYCDKQFQDTPSARKRHLQGVQHQRARALYYNSFKDPNQIQTENFGRGVCNH 55
           MP  KY+CDYCDKQFQDTPSARKRHLQG+QHQRA+AL+Y+SF+DPNQIQ E +G+GVCN 
Sbjct: 1   MPLGKYHCDYCDKQFQDTPSARKRHLQGLQHQRAKALWYDSFRDPNQIQAEGYGKGVCNR 60

Query: 54  FVRTGFCQYGDSCKYIHP 1
           FVRTGFCQYGDSCKY HP
Sbjct: 61  FVRTGFCQYGDSCKYFHP 78


>gb|ADE76311.1| unknown [Picea sitchensis]
          Length = 126

 Score =  141 bits (356), Expect = 5e-32
 Identities = 58/78 (74%), Positives = 67/78 (85%)
 Frame = -3

Query: 234 MPFPKYYCDYCDKQFQDTPSARKRHLQGVQHQRARALYYNSFKDPNQIQTENFGRGVCNH 55
           MP  KYYCDYCDKQFQDTPSARKRHLQGVQHQRAR L+++SFKDP Q+  EN G+ +C  
Sbjct: 1   MPLEKYYCDYCDKQFQDTPSARKRHLQGVQHQRARKLWFDSFKDPQQLHAENAGKAICTR 60

Query: 54  FVRTGFCQYGDSCKYIHP 1
           FV+TGFCQ+GD+CKY HP
Sbjct: 61  FVKTGFCQFGDNCKYFHP 78


>gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays]
          Length = 166

 Score =  124 bits (310), Expect = 1e-26
 Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 8/86 (9%)
 Frame = -3

Query: 234 MPFPKYYCDYCDKQFQDTPSARKRHLQGVQHQRARALYYNSFKDPNQ--------IQTEN 79
           MP  KYYCDYCDKQFQDTP+ARKRHLQGVQHQRARAL+Y+S +  +Q        +    
Sbjct: 1   MPLGKYYCDYCDKQFQDTPAARKRHLQGVQHQRARALWYDSIRHQDQHGGASSLLLPDGT 60

Query: 78  FGRGVCNHFVRTGFCQYGDSCKYIHP 1
             +G+C+HFVRTG C+YGDSC+Y HP
Sbjct: 61  LAKGICHHFVRTGACKYGDSCRYFHP 86


>ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor]
           gi|241927354|gb|EES00499.1| hypothetical protein
           SORBIDRAFT_03g009590 [Sorghum bicolor]
          Length = 164

 Score =  122 bits (306), Expect = 3e-26
 Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 8/86 (9%)
 Frame = -3

Query: 234 MPFPKYYCDYCDKQFQDTPSARKRHLQGVQHQRARALYYNSFKDPNQ--------IQTEN 79
           MP  KYYCDYCDKQFQDTP+AR+RHLQGVQHQRARAL+Y+S +   Q        +    
Sbjct: 1   MPLGKYYCDYCDKQFQDTPAARRRHLQGVQHQRARALWYDSIRHQEQHGGVSSLLLPDGT 60

Query: 78  FGRGVCNHFVRTGFCQYGDSCKYIHP 1
             +G+C+HFVRTG C+YGDSC+Y HP
Sbjct: 61  LAKGICHHFVRTGTCKYGDSCRYFHP 86


>ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           [Cucumis sativus] gi|449508616|ref|XP_004163363.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           3-like [Cucumis sativus]
          Length = 156

 Score =  120 bits (301), Expect = 1e-25
 Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
 Frame = -3

Query: 234 MPFPKYYCDYCDKQFQDTPSARKRHLQGVQHQRARALYYNSFKDPNQI--QTENFGRGVC 61
           MP  KYYCDYCDKQFQDTP ARKRHLQ + HQ+A+AL+++SFKD NQ    + +F   +C
Sbjct: 1   MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPRIC 60

Query: 60  NHFVRTGFCQYGDSCKYIHP 1
           N F+ TGFCQYGDSCKY HP
Sbjct: 61  NRFLSTGFCQYGDSCKYFHP 80


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