BLASTX nr result

ID: Cimicifuga21_contig00038865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038865
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
ref|XP_002517992.1| conserved hypothetical protein [Ricinus comm...    71   8e-11
ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo]         65   4e-09
ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264...    62   5e-08

>ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|222858304|gb|EEE95851.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 37/60 (61%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
 Frame = +3

Query: 18  VTGLLPKIRTIRSIYESPRDSGPAKKVAELLGKKSYFGE-EEMGMEASVCQALSFDDEEE 194
           VT +LP I+T+RS+ E+PRDSGPAK+VA+L+G+KSYF   EE     SVCQALSF +EE+
Sbjct: 383 VTDMLPNIKTVRSVAETPRDSGPAKRVADLVGRKSYFPPVEETAAGDSVCQALSFAEEED 442


>ref|XP_002517992.1| conserved hypothetical protein [Ricinus communis]
           gi|223542974|gb|EEF44510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 443

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/64 (59%), Positives = 48/64 (75%), Gaps = 4/64 (6%)
 Frame = +3

Query: 18  VTGLLPKIRTIRSIYESPRDSGPAKKVAELLGKKSYF----GEEEMGMEASVCQALSFDD 185
           V  +LPKI+T RS+ E+PRDSG AK+VA+L+GKKS+F    GEE  G   S+CQAL FD 
Sbjct: 381 VADVLPKIKTFRSVNETPRDSGAAKRVADLVGKKSFFSINEGEETAG--DSICQALRFDF 438

Query: 186 EEEE 197
           EEE+
Sbjct: 439 EEED 442


>ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|222862564|gb|EEF00071.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = +3

Query: 3   PPSLN-VTGLLPKIRTIRSIYESPRDSGPAKKVAELLGKKSYFGEEEMGMEASVCQALSF 179
           PP+++ V  +LPKIRT+R + E+PRDSG AK+VA+L+GKK +F  EE     SVCQALSF
Sbjct: 377 PPTVSTVADVLPKIRTVRCVAETPRDSGAAKRVADLVGKKPFFCIEEAEAGDSVCQALSF 436

Query: 180 DDEEEE 197
             E+ E
Sbjct: 437 AGEDGE 442


>gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 458

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/57 (59%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
 Frame = +3

Query: 30  LPKIRTIRSIYESPRDSGPAKKVAELLGKK-SYFGEEEMGMEASVCQALSFDDEEEE 197
           LP+IRT R    SPRDSGPAK+V+EL+G K S+F +EE  MEA +CQ L+F ++EEE
Sbjct: 404 LPRIRTTRCANMSPRDSGPAKRVSELIGSKTSFFADEE--MEALICQKLNFAEDEEE 458


>ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264907 [Vitis vinifera]
          Length = 466

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   PPS----LNVTGLLPKIRTIRSIYESPRDSGPAKKVAELLGKKSYFGEEEMGMEASVCQA 170
           PPS      +  +LP IRT R I ESPR+SGPAK+VAEL+G+KSYF  +E G + SV  +
Sbjct: 392 PPSPRSITKMPDILPMIRTDRCINESPRNSGPAKRVAELIGRKSYFCADEDGEDHSVSLS 451

Query: 171 LSF 179
           L F
Sbjct: 452 LDF 454


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