BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038844
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera]    91   1e-16
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]            89   4e-16
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...    86   2e-15
ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846...    85   7e-15
emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]    85   7e-15

>emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera]
          Length = 1884

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/111 (43%), Positives = 62/111 (55%), Gaps = 13/111 (11%)
 Frame = +2

Query: 14   IKRILRYLKGTISIGLRILKQSSLDVYAFSDVDWAXXXXXXXXXXXXXXXLGSNCISWSA 193
            +KRILRYLKGT+  G+   KQSSL +  F D DWA               LG+NCISWS+
Sbjct: 1123 VKRILRYLKGTMEHGIXFFKQSSLRLTGFCDADWAGCTNTRRSTSGYCIFLGANCISWSS 1182

Query: 194  KKKPIV-------------STTAELTWLSFILRDSGFYQDKPQILFCYNMS 307
            K++P V             S+ AE+TWL+F+LRD G    +P  L C N+S
Sbjct: 1183 KRQPTVSRSSAEAEYRSLASSAAEITWLTFLLRDIGIQLREPPQLLCDNLS 1233


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/114 (42%), Positives = 64/114 (56%), Gaps = 13/114 (11%)
 Frame = +2

Query: 5    FQMIKRILRYLKGTISIGLRILKQSSLDVYAFSDVDWAXXXXXXXXXXXXXXXLGSNCIS 184
            F ++KRILRY+KGTI +GL I K  +L + A+SD DWA               LG N IS
Sbjct: 1208 FGLLKRILRYVKGTIHLGLHIKKNQNLSLVAYSDSDWAGCKETRRSTTGFCTLLGCNLIS 1267

Query: 185  WSAKKKPIVSTTA-------------ELTWLSFILRDSGFYQDKPQILFCYNMS 307
            WSAK++  VS ++             ELTWLSF+LRD G  Q  P ++ C N+S
Sbjct: 1268 WSAKRQETVSKSSTEAEYRALTAVAQELTWLSFLLRDIGVTQTHPTLVKCDNLS 1321


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
            Arabidopsis thaliana BAC gb|AF080119 and is a member of
            the reverse transcriptase family PF|00078 [Arabidopsis
            thaliana]
          Length = 1415

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/114 (42%), Positives = 66/114 (57%), Gaps = 13/114 (11%)
 Frame = +2

Query: 5    FQMIKRILRYLKGTISIGLRILKQSSLDVYAFSDVDWAXXXXXXXXXXXXXXXLGSNCIS 184
            F ++KRILRY+KGTI +GL I + S+L + A+SD D A               LGSN IS
Sbjct: 1182 FGLLKRILRYIKGTIGMGLPIKRNSTLTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLIS 1241

Query: 185  WSAKKKPIVSTTA-------------ELTWLSFILRDSGFYQDKPQILFCYNMS 307
            WSAK++P VS ++             E+TW+SF+LRD G  Q  P  ++C N+S
Sbjct: 1242 WSAKRQPTVSNSSTEAEYRALTYAAREITWISFLLRDLGIPQYLPTQVYCDNLS 1295


>ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846463 [Brachypodium
            distachyon]
          Length = 989

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 13/114 (11%)
 Frame = +2

Query: 2    HFQMIKRILRYLKGTISIGLRILKQSSLDVYAFSDVDWAXXXXXXXXXXXXXXXLGSNCI 181
            H++++KRILR++KG +S GLR  + SS  +  F+D DWA               LG N +
Sbjct: 803  HYEVVKRILRFVKGIVSTGLRFQRSSSTRLGIFTDADWAGCSDDRRSTGGFAVFLGPNLV 862

Query: 182  SWSAKKKPIVST-------------TAELTWLSFILRDSGFYQDKPQILFCYNM 304
            SWS++K+P VS              TAE  W+  +L++ G YQ +P +L+C N+
Sbjct: 863  SWSSRKQPTVSRSSTEAEYKVLANGTAEAIWIQSVLKELGVYQSRPPVLWCDNI 916


>emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]
          Length = 1556

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 45/98 (45%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
 Frame = +2

Query: 2    HFQMIKRILRYLKGTISIGLRILKQSSLDVYAFSDVDWAXXXXXXXXXXXXXXXLGSNCI 181
            H +M++RILRY+KGTI IGL     ++LD+ AFSD DWA               LG N I
Sbjct: 1327 HLKMVRRILRYVKGTIDIGLHFTSHTTLDLCAFSDADWAGCLTTRRSITGYCTFLGGNII 1386

Query: 182  SWSAKKKPIVS-------------TTAELTWLSFILRD 256
            SW AKK+  +S             TTAELTW+SFIL D
Sbjct: 1387 SWCAKKQHTISRSSTEAEYRAMAHTTAELTWMSFILND 1424