BLASTX nr result

ID: Cimicifuga21_contig00038836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038836
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267062.2| PREDICTED: uncharacterized protein LOC100262...    84   1e-14
emb|CBI22563.3| unnamed protein product [Vitis vinifera]               84   1e-14
tpg|DAA62684.1| TPA: hypothetical protein ZEAMMB73_454199 [Zea m...    80   2e-13
ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265...    79   3e-13
ref|XP_003600608.1| Regulator of nonsense transcripts-like prote...    79   3e-13

>ref|XP_002267062.2| PREDICTED: uncharacterized protein LOC100262126 [Vitis vinifera]
          Length = 1095

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
 Frame = +3

Query: 39  LEKFPLIFCPVSRLFSLKGIGRHGV--LIMDNACQVKECESVVPLQLKGLRHVILAGNEY 212
           LEK  L+FC  S    LK  G   V  L++D A Q+KECES +PLQ+ GLRH IL G+E 
Sbjct: 605 LEKACLLFCTASSSVKLKMKGMTPVELLVIDEAAQLKECESTIPLQISGLRHAILVGDEM 664

Query: 213 ELPTTMSSKISEDVGFAKSLFE 278
           +LP  + SKISE  GF +SLFE
Sbjct: 665 QLPALVKSKISEKAGFGRSLFE 686


>emb|CBI22563.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
 Frame = +3

Query: 39  LEKFPLIFCPVSRLFSLKGIGRHGV--LIMDNACQVKECESVVPLQLKGLRHVILAGNEY 212
           LEK  L+FC  S    LK  G   V  L++D A Q+KECES +PLQ+ GLRH IL G+E 
Sbjct: 467 LEKACLLFCTASSSVKLKMKGMTPVELLVIDEAAQLKECESTIPLQISGLRHAILVGDEM 526

Query: 213 ELPTTMSSKISEDVGFAKSLFE 278
           +LP  + SKISE  GF +SLFE
Sbjct: 527 QLPALVKSKISEKAGFGRSLFE 548


>tpg|DAA62684.1| TPA: hypothetical protein ZEAMMB73_454199 [Zea mays]
          Length = 925

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/83 (45%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
 Frame = +3

Query: 39  LEKFPLIFCPVS---RLFSLKGIGRHGVLIMDNACQVKECESVVPLQLKGLRHVILAGNE 209
           L+   ++ C  S   RL  ++      VL++D A Q+KECES++PLQL G+RH +L G+E
Sbjct: 585 LQNAKIVLCTASSSYRLHYMQKAQPLEVLVVDEAAQLKECESLIPLQLPGVRHAVLIGDE 644

Query: 210 YELPTTMSSKISEDVGFAKSLFE 278
           Y+LP  + SK+ ED GF +SLFE
Sbjct: 645 YQLPALVKSKVCEDAGFGRSLFE 667


>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
          Length = 2792

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
 Frame = +3

Query: 54  LIFCPVSRLFSLKGIGRH--GVLIMDNACQVKECESVVPLQLKGLRHVILAGNEYELPTT 227
           LIFC  S  + L         +L++D A Q+KECES +PLQL G+RH IL G+E +LP  
Sbjct: 567 LIFCTASSSYKLHSANMKPLDLLVIDEAAQLKECESTIPLQLPGIRHAILIGDECQLPAM 626

Query: 228 MSSKISEDVGFAKSLFE 278
           +SSK+S++ GF +SLFE
Sbjct: 627 VSSKVSKEAGFGRSLFE 643


>ref|XP_003600608.1| Regulator of nonsense transcripts-like protein [Medicago
           truncatula] gi|355489656|gb|AES70859.1| Regulator of
           nonsense transcripts-like protein [Medicago truncatula]
          Length = 897

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
 Frame = +3

Query: 54  LIFCPVS---RLFSLKGIGRHGVLIMDNACQVKECESVVPLQLKGLRHVILAGNEYELPT 224
           +IFC  S   RL+S +G+ R  +L++D A Q+KECE+ +PLQL GLRHV+L G+E +LP 
Sbjct: 619 MIFCTASSSSRLYS-EGLDRLEMLVIDEAAQLKECEANIPLQLPGLRHVVLIGDEKQLPA 677

Query: 225 TMSSKISEDVGFAKSLFE 278
            + S+IS+  GF +SLFE
Sbjct: 678 LVKSEISDKAGFGRSLFE 695


Top