BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038828
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat...   141   5e-32
ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat...   141   6e-32
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat...   137   1e-30
ref|XP_003628710.1| Pentatricopeptide repeat-containing protein ...   136   2e-30

>ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|222863951|gb|EEF01082.1|
           predicted protein [Populus trichocarpa]
          Length = 743

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/86 (76%), Positives = 78/86 (90%)
 Frame = -1

Query: 261 DAIGWATLLSSCRLYGDMEIGEWAAKSLLELEPENPACYILLSKIYAAKGKWDDVARLRR 82
           D+IGWATLLSSCRLYG+ EIG+WAA+SLLEL+P+NPA YILLS IYAAKGKW +VA+LRR
Sbjct: 539 DSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRR 598

Query: 81  GMRDKGMRKEPGYSWIKYKNPVIVGS 4
           GMR+KG RKEPG+SWIKYK+ V + S
Sbjct: 599 GMREKGARKEPGFSWIKYKSKVYIFS 624


>ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
           gi|449493520|ref|XP_004159329.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  141 bits (356), Expect = 5e-32
 Identities = 65/86 (75%), Positives = 78/86 (90%)
 Frame = -1

Query: 261 DAIGWATLLSSCRLYGDMEIGEWAAKSLLELEPENPACYILLSKIYAAKGKWDDVARLRR 82
           DAIGWATLLSSCRL G++EIG+WAA+SL +LEP+NPA YILLS IYAAKGKWDDVA+LR+
Sbjct: 539 DAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRK 598

Query: 81  GMRDKGMRKEPGYSWIKYKNPVIVGS 4
           GMR+ G++KEPG+SWIKYKN V + S
Sbjct: 599 GMREMGVKKEPGHSWIKYKNKVHIFS 624


>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
           unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  141 bits (355), Expect = 6e-32
 Identities = 64/86 (74%), Positives = 75/86 (87%)
 Frame = -1

Query: 261 DAIGWATLLSSCRLYGDMEIGEWAAKSLLELEPENPACYILLSKIYAAKGKWDDVARLRR 82
           D +GWATLLSSCR++GDMEIG+WAA SL+ LEP+NPA Y+LLS +YA+KGKWD VA+LRR
Sbjct: 539 DVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRR 598

Query: 81  GMRDKGMRKEPGYSWIKYKNPVIVGS 4
           GMRDK +RKEPGYSWIKYK  V V S
Sbjct: 599 GMRDKRVRKEPGYSWIKYKGKVHVFS 624


>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  137 bits (344), Expect = 1e-30
 Identities = 64/86 (74%), Positives = 75/86 (87%)
 Frame = -1

Query: 261 DAIGWATLLSSCRLYGDMEIGEWAAKSLLELEPENPACYILLSKIYAAKGKWDDVARLRR 82
           DAIGWA+LLSSCR + +MEIG+WAA+SLL+LEP N A YILLS IYAAKGKW++VA LR+
Sbjct: 543 DAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRK 602

Query: 81  GMRDKGMRKEPGYSWIKYKNPVIVGS 4
           GMRDKG+RKEPG SWIKYKN V + S
Sbjct: 603 GMRDKGLRKEPGCSWIKYKNQVHIFS 628


>ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522732|gb|AET03186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/86 (72%), Positives = 74/86 (86%)
 Frame = -1

Query: 261 DAIGWATLLSSCRLYGDMEIGEWAAKSLLELEPENPACYILLSKIYAAKGKWDDVARLRR 82
           DAI WATLLSSCR YG+M+IG+WAA+ L+EL+P N A Y+LLS +YAAKGKW++VARLR+
Sbjct: 544 DAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRK 603

Query: 81  GMRDKGMRKEPGYSWIKYKNPVIVGS 4
            MRDKG+RKEPG SWIKYKN V V S
Sbjct: 604 DMRDKGLRKEPGCSWIKYKNQVHVFS 629