BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038780
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29825.3| unnamed protein product [Vitis vinifera]              131   5e-29
ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi...   131   5e-29
ref|XP_002529510.1| pentatricopeptide repeat-containing protein,...   130   1e-28
ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_002889252.1| pentatricopeptide repeat-containing protein ...   117   1e-24

>emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/126 (50%), Positives = 91/126 (72%)
 Frame = +1

Query: 7   LMKCFCRKRKLTLAFRLWMKYLRELPGRDKEALELMEKNFDLANVELGVRGVLKLDMKCN 186
           LM   CRK KL++AF LW+KYLR LP ++ E L+L E++F+   +E  VR +L+++ K N
Sbjct: 529 LMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLN 588

Query: 187 AVVPSLYNMFLIGLCQARMVDDALKIFNVLEEYKIGVTPPSCVYLINGLCDEKKVDQALD 366
               + Y ++LIGLCQAR  ++ALKIF VL+E ++ V PPSCV LINGLC +  ++ A+D
Sbjct: 589 NFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVD 648

Query: 367 VFLYTL 384
           +FLYTL
Sbjct: 649 IFLYTL 654


>ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/126 (50%), Positives = 91/126 (72%)
 Frame = +1

Query: 7   LMKCFCRKRKLTLAFRLWMKYLRELPGRDKEALELMEKNFDLANVELGVRGVLKLDMKCN 186
           LM   CRK KL++AF LW+KYLR LP ++ E L+L E++F+   +E  VR +L+++ K N
Sbjct: 605 LMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLN 664

Query: 187 AVVPSLYNMFLIGLCQARMVDDALKIFNVLEEYKIGVTPPSCVYLINGLCDEKKVDQALD 366
               + Y ++LIGLCQAR  ++ALKIF VL+E ++ V PPSCV LINGLC +  ++ A+D
Sbjct: 665 NFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVD 724

Query: 367 VFLYTL 384
           +FLYTL
Sbjct: 725 IFLYTL 730


>ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531026|gb|EEF32879.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 804

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/121 (52%), Positives = 86/121 (71%)
 Frame = +1

Query: 22  CRKRKLTLAFRLWMKYLRELPGRDKEALELMEKNFDLANVELGVRGVLKLDMKCNAVVPS 201
           CR+ K+TLAF LW+KYLR +PGRD E L+ +E+NF+   VE  VRG+L++D K N    +
Sbjct: 605 CRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLA 664

Query: 202 LYNMFLIGLCQARMVDDALKIFNVLEEYKIGVTPPSCVYLINGLCDEKKVDQALDVFLYT 381
            Y ++LIGLCQA  +++ALKIF  LEE+ + VTPPSCV LI  L     +D A ++FLYT
Sbjct: 665 PYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYT 724

Query: 382 L 384
           +
Sbjct: 725 I 725


>ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|222854000|gb|EEE91547.1|
           predicted protein [Populus trichocarpa]
          Length = 789

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/126 (48%), Positives = 85/126 (67%)
 Frame = +1

Query: 7   LMKCFCRKRKLTLAFRLWMKYLRELPGRDKEALELMEKNFDLANVELGVRGVLKLDMKCN 186
           +M   CR+ +L  AF LW+KYLR +  ++ EA++ +E  F+   VE  VRG+L++D K N
Sbjct: 600 MMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLN 659

Query: 187 AVVPSLYNMFLIGLCQARMVDDALKIFNVLEEYKIGVTPPSCVYLINGLCDEKKVDQALD 366
                 Y ++LIGLCQ R V +ALKIF +LEEYK+ +TPP CV LI  L  E  +D+A+D
Sbjct: 660 DFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAID 719

Query: 367 VFLYTL 384
           VFLYT+
Sbjct: 720 VFLYTI 725


>ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335093|gb|EFH65511.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 780

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/126 (46%), Positives = 84/126 (66%)
 Frame = +1

Query: 7   LMKCFCRKRKLTLAFRLWMKYLRELPGRDKEALELMEKNFDLANVELGVRGVLKLDMKCN 186
           LM   CR+RKL +AF LWMKYL+++   D E    +E+ F     E  +R +++LD + +
Sbjct: 591 LMTWSCRRRKLLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKD 650

Query: 187 AVVPSLYNMFLIGLCQARMVDDALKIFNVLEEYKIGVTPPSCVYLINGLCDEKKVDQALD 366
            +    Y ++LIGLCQ+    +AL +F+VL E KI VTPPSCV LI+GLC  +++D A+D
Sbjct: 651 ELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAID 710

Query: 367 VFLYTL 384
           VFLYTL
Sbjct: 711 VFLYTL 716