BLASTX nr result

ID: Cimicifuga21_contig00038766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038766
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Grou...    69   4e-10
ref|XP_003542610.1| PREDICTED: F-box/kelch-repeat protein At1g57...    63   3e-08
gb|AFK44646.1| unknown [Medicago truncatula]                           62   6e-08
gb|ACJ85554.1| unknown [Medicago truncatula]                           62   6e-08
ref|NP_564725.1| F-box protein [Arabidopsis thaliana] gi|7517266...    61   1e-07

>dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|125603599|gb|EAZ42924.1| hypothetical protein
           OsJ_27514 [Oryza sativa Japonica Group]
          Length = 760

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
 Frame = -1

Query: 287 GVCNLF-PIYSDAYAMNI-PKLANA--VIRDTKYGWLLMTRGDTSIFFFNPLTAETIKIP 120
           G C +F P+    Y+M + P  AN     R +K GW+++T+ D +IF  NP T E +K+ 
Sbjct: 412 GACKMFDPLCGVEYSMKVGPFDANERQAFRFSKDGWVIVTQSDDNIFVINPFTKEIVKLS 471

Query: 119 DLADWYFFVNVPFSSPPTSTDCVIFGHMDSYRND 18
             + WY F  + FSS PTS DCV  G   S + D
Sbjct: 472 MASGWYRFTGISFSSVPTSPDCVFLGVCSSPKGD 505


>ref|XP_003542610.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Glycine max]
          Length = 376

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = -1

Query: 269 PIYSDAYAMNIPKLANAVIRDTKYGWLLMTRGDT-SIFFFNPLTAETIKIPDLADWYFFV 93
           P++   Y++ +P+L+ + +  TK GWLL+ R  T  +FFFNP T E IK+P     Y   
Sbjct: 97  PVHRKTYSIELPELSGSRVCYTKDGWLLLYRPRTHRVFFFNPFTQEIIKLPRFEMSYQI- 155

Query: 92  NVPFSSPPTSTDCVIF 45
            V FS  PTS+DCV+F
Sbjct: 156 -VAFSCAPTSSDCVLF 170


>gb|AFK44646.1| unknown [Medicago truncatula]
          Length = 376

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = -1

Query: 269 PIYSDAYAMNIPKLANAVIRDTKYGWLLMTRGDTS-IFFFNPLTAETIKIPDLADWYFFV 93
           P+    Y++  P+L  + +  TK GWLL+ R  T  +FFFNP T ETIK+P     Y   
Sbjct: 97  PVQRKTYSIEFPELNGSRVCYTKDGWLLLYRPRTDRVFFFNPFTRETIKMPRFEMTYQI- 155

Query: 92  NVPFSSPPTSTDCVIF 45
            V FS  PTS DCV+F
Sbjct: 156 -VAFSCAPTSPDCVLF 170


>gb|ACJ85554.1| unknown [Medicago truncatula]
          Length = 220

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = -1

Query: 269 PIYSDAYAMNIPKLANAVIRDTKYGWLLMTRGDTS-IFFFNPLTAETIKIPDLADWYFFV 93
           P+    Y++  P+L  + +  TK GWLL+ R  T  +FFFNP T ETIK+P     Y   
Sbjct: 97  PVQRKTYSIEFPELNGSRVCYTKDGWLLLYRPRTDRVFFFNPFTRETIKMPRFEMTYQI- 155

Query: 92  NVPFSSPPTSTDCVIF 45
            V FS  PTS DCV+F
Sbjct: 156 -VAFSCAPTSPDCVLF 170


>ref|NP_564725.1| F-box protein [Arabidopsis thaliana]
           gi|75172668|sp|Q9FVS1.1|FBK23_ARATH RecName:
           Full=F-box/kelch-repeat protein At1g57790
           gi|11079521|gb|AAG29231.1|AC079732_2 hypothetical
           protein [Arabidopsis thaliana]
           gi|20466201|gb|AAM20418.1| unknown protein [Arabidopsis
           thaliana] gi|30984578|gb|AAP42752.1| At1g57790
           [Arabidopsis thaliana] gi|332195346|gb|AEE33467.1| F-box
           protein [Arabidopsis thaliana]
          Length = 352

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
 Frame = -1

Query: 251 YAMNIPK-LANAVIRDTKYGWLLMTRGDTSIF-FFNPLTAETIKIPDLADWYFFVNVPFS 78
           Y M +PK L   ++R +K GWLLM++ D+S F  FNP T + + +P L  + ++  V FS
Sbjct: 80  YTMELPKSLVGFIVRYSKDGWLLMSQEDSSHFVLFNPFTMDVVALPFLHLFTYYQLVGFS 139

Query: 77  SPPTSTDCVIF 45
           S PTS++CV+F
Sbjct: 140 SAPTSSECVVF 150


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