BLASTX nr result
ID: Cimicifuga21_contig00038766
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00038766 (287 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Grou... 69 4e-10 ref|XP_003542610.1| PREDICTED: F-box/kelch-repeat protein At1g57... 63 3e-08 gb|AFK44646.1| unknown [Medicago truncatula] 62 6e-08 gb|ACJ85554.1| unknown [Medicago truncatula] 62 6e-08 ref|NP_564725.1| F-box protein [Arabidopsis thaliana] gi|7517266... 61 1e-07 >dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Group] gi|125603599|gb|EAZ42924.1| hypothetical protein OsJ_27514 [Oryza sativa Japonica Group] Length = 760 Score = 68.9 bits (167), Expect = 4e-10 Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 4/94 (4%) Frame = -1 Query: 287 GVCNLF-PIYSDAYAMNI-PKLANA--VIRDTKYGWLLMTRGDTSIFFFNPLTAETIKIP 120 G C +F P+ Y+M + P AN R +K GW+++T+ D +IF NP T E +K+ Sbjct: 412 GACKMFDPLCGVEYSMKVGPFDANERQAFRFSKDGWVIVTQSDDNIFVINPFTKEIVKLS 471 Query: 119 DLADWYFFVNVPFSSPPTSTDCVIFGHMDSYRND 18 + WY F + FSS PTS DCV G S + D Sbjct: 472 MASGWYRFTGISFSSVPTSPDCVFLGVCSSPKGD 505 >ref|XP_003542610.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Glycine max] Length = 376 Score = 62.8 bits (151), Expect = 3e-08 Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%) Frame = -1 Query: 269 PIYSDAYAMNIPKLANAVIRDTKYGWLLMTRGDT-SIFFFNPLTAETIKIPDLADWYFFV 93 P++ Y++ +P+L+ + + TK GWLL+ R T +FFFNP T E IK+P Y Sbjct: 97 PVHRKTYSIELPELSGSRVCYTKDGWLLLYRPRTHRVFFFNPFTQEIIKLPRFEMSYQI- 155 Query: 92 NVPFSSPPTSTDCVIF 45 V FS PTS+DCV+F Sbjct: 156 -VAFSCAPTSSDCVLF 170 >gb|AFK44646.1| unknown [Medicago truncatula] Length = 376 Score = 61.6 bits (148), Expect = 6e-08 Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 1/76 (1%) Frame = -1 Query: 269 PIYSDAYAMNIPKLANAVIRDTKYGWLLMTRGDTS-IFFFNPLTAETIKIPDLADWYFFV 93 P+ Y++ P+L + + TK GWLL+ R T +FFFNP T ETIK+P Y Sbjct: 97 PVQRKTYSIEFPELNGSRVCYTKDGWLLLYRPRTDRVFFFNPFTRETIKMPRFEMTYQI- 155 Query: 92 NVPFSSPPTSTDCVIF 45 V FS PTS DCV+F Sbjct: 156 -VAFSCAPTSPDCVLF 170 >gb|ACJ85554.1| unknown [Medicago truncatula] Length = 220 Score = 61.6 bits (148), Expect = 6e-08 Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 1/76 (1%) Frame = -1 Query: 269 PIYSDAYAMNIPKLANAVIRDTKYGWLLMTRGDTS-IFFFNPLTAETIKIPDLADWYFFV 93 P+ Y++ P+L + + TK GWLL+ R T +FFFNP T ETIK+P Y Sbjct: 97 PVQRKTYSIEFPELNGSRVCYTKDGWLLLYRPRTDRVFFFNPFTRETIKMPRFEMTYQI- 155 Query: 92 NVPFSSPPTSTDCVIF 45 V FS PTS DCV+F Sbjct: 156 -VAFSCAPTSPDCVLF 170 >ref|NP_564725.1| F-box protein [Arabidopsis thaliana] gi|75172668|sp|Q9FVS1.1|FBK23_ARATH RecName: Full=F-box/kelch-repeat protein At1g57790 gi|11079521|gb|AAG29231.1|AC079732_2 hypothetical protein [Arabidopsis thaliana] gi|20466201|gb|AAM20418.1| unknown protein [Arabidopsis thaliana] gi|30984578|gb|AAP42752.1| At1g57790 [Arabidopsis thaliana] gi|332195346|gb|AEE33467.1| F-box protein [Arabidopsis thaliana] Length = 352 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 2/71 (2%) Frame = -1 Query: 251 YAMNIPK-LANAVIRDTKYGWLLMTRGDTSIF-FFNPLTAETIKIPDLADWYFFVNVPFS 78 Y M +PK L ++R +K GWLLM++ D+S F FNP T + + +P L + ++ V FS Sbjct: 80 YTMELPKSLVGFIVRYSKDGWLLMSQEDSSHFVLFNPFTMDVVALPFLHLFTYYQLVGFS 139 Query: 77 SPPTSTDCVIF 45 S PTS++CV+F Sbjct: 140 SAPTSSECVVF 150