BLASTX nr result

ID: Cimicifuga21_contig00038708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038708
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874966.1| ABC1 protein [Arabidopsis lyrata subsp. lyra...    98   8e-19
ref|NP_192075.1| ABC transporter 1 [Arabidopsis thaliana] gi|385...    96   2e-18
emb|CAA04557.1| ABC1 protein [Arabidopsis thaliana]                    95   5e-18
ref|XP_003535303.1| PREDICTED: chaperone activity of bc1 complex...    93   3e-17
ref|XP_003519721.1| PREDICTED: chaperone activity of bc1 complex...    93   3e-17

>ref|XP_002874966.1| ABC1 protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320803|gb|EFH51225.1| ABC1 protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 622

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = -3

Query: 232 HRLTPPPDEAYSLHRKLSGAFLACMKIGAVVPCRELLLEVYEKYQFDDE 86
           HRLTPPPDEAYSLHRKLSGAFLAC+K+GA VPCR+LLL+VY KYQFDDE
Sbjct: 560 HRLTPPPDEAYSLHRKLSGAFLACIKLGATVPCRDLLLQVYNKYQFDDE 608


>ref|NP_192075.1| ABC transporter 1 [Arabidopsis thaliana] gi|3859609|gb|AAC72875.1|
           Arabidopsis thaliana ABC1 protein (GB:AJ001158)
           [Arabidopsis thaliana] gi|7268209|emb|CAB77736.1|
           putative ABC transporter [Arabidopsis thaliana]
           gi|332656658|gb|AEE82058.1| ABC transporter 1
           [Arabidopsis thaliana]
          Length = 623

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/49 (85%), Positives = 47/49 (95%)
 Frame = -3

Query: 232 HRLTPPPDEAYSLHRKLSGAFLACMKIGAVVPCRELLLEVYEKYQFDDE 86
           HRL+PPPDEAYSLHRKLSGAFLAC+K+GA VPCR+LLL+VY KYQFDDE
Sbjct: 562 HRLSPPPDEAYSLHRKLSGAFLACIKLGATVPCRDLLLQVYNKYQFDDE 610


>emb|CAA04557.1| ABC1 protein [Arabidopsis thaliana]
          Length = 623

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/49 (83%), Positives = 47/49 (95%)
 Frame = -3

Query: 232 HRLTPPPDEAYSLHRKLSGAFLACMKIGAVVPCRELLLEVYEKYQFDDE 86
           HRL+PPPDEAYSLHRKLSGAFLAC+K+GA VPCR++LL+VY KYQFDDE
Sbjct: 562 HRLSPPPDEAYSLHRKLSGAFLACIKLGATVPCRDVLLQVYNKYQFDDE 610


>ref|XP_003535303.1| PREDICTED: chaperone activity of bc1 complex-like,
           mitochondrial-like [Glycine max]
          Length = 611

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/49 (85%), Positives = 47/49 (95%)
 Frame = -3

Query: 232 HRLTPPPDEAYSLHRKLSGAFLACMKIGAVVPCRELLLEVYEKYQFDDE 86
           HRLTPPPDEAYSLHRKLSGAFLAC+KIGAVVPCRELLLEVY+ ++F +E
Sbjct: 552 HRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLEVYKHHKFGEE 600


>ref|XP_003519721.1| PREDICTED: chaperone activity of bc1 complex-like,
           mitochondrial-like [Glycine max]
          Length = 618

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/49 (85%), Positives = 47/49 (95%)
 Frame = -3

Query: 232 HRLTPPPDEAYSLHRKLSGAFLACMKIGAVVPCRELLLEVYEKYQFDDE 86
           HRLTPPPDEAYSLHRKLSGAFLAC+KIGAVVPCRELLLEVY+ ++F +E
Sbjct: 559 HRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLEVYKHHKFGEE 607


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