BLASTX nr result

ID: Cimicifuga21_contig00038674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038674
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   157   8e-48
ref|XP_002461976.1| hypothetical protein SORBIDRAFT_02g011430 [S...   138   8e-42
tpg|DAA39634.1| TPA: hypothetical protein ZEAMMB73_857219, parti...   137   1e-41
gb|EEC85075.1| hypothetical protein OsI_32422 [Oryza sativa Indi...   137   3e-40
gb|EEE70249.1| hypothetical protein OsJ_30371 [Oryza sativa Japo...   137   3e-40

>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine
           max]
          Length = 2304

 Score =  157 bits (398), Expect(2) = 8e-48
 Identities = 74/89 (83%), Positives = 84/89 (94%)
 Frame = +3

Query: 351 FFMSWDHHDILSLQPEYNASNRCSTSARLRSIAPYEGRQETAIYATDLRTGIVIRCKVFI 530
           F  SWDHHDILS++PEYN+S++CSTSAR+RSIAPY GR+ETA+YA DL+TGIVIRCKVFI
Sbjct: 53  FQWSWDHHDILSVEPEYNSSSKCSTSARIRSIAPYSGRKETAVYAADLQTGIVIRCKVFI 112

Query: 531 DEISRIQIFHNSIKLDLDGLATLRVRAFD 617
           D ISRIQIFHNSIKLDL+GLATLRVRAFD
Sbjct: 113 DNISRIQIFHNSIKLDLEGLATLRVRAFD 141



 Score = 58.5 bits (140), Expect(2) = 8e-48
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +1

Query: 262 TGPHIADVNILLPPRMTHPVEYLLLGSDGCF 354
           +GPHIADVNILLPP+MT PV+Y L GSDGCF
Sbjct: 23  SGPHIADVNILLPPKMTFPVDYRLQGSDGCF 53


>ref|XP_002461976.1| hypothetical protein SORBIDRAFT_02g011430 [Sorghum bicolor]
           gi|241925353|gb|EER98497.1| hypothetical protein
           SORBIDRAFT_02g011430 [Sorghum bicolor]
          Length = 1431

 Score =  138 bits (347), Expect(2) = 8e-42
 Identities = 61/89 (68%), Positives = 79/89 (88%)
 Frame = +3

Query: 351 FFMSWDHHDILSLQPEYNASNRCSTSARLRSIAPYEGRQETAIYATDLRTGIVIRCKVFI 530
           F  SWDHHD++S++PEYN S+RCSTSARL SIAPY GR+ET++YATD+ +GI+I CKVF+
Sbjct: 58  FSWSWDHHDLISVKPEYNDSSRCSTSARLASIAPYSGRRETSVYATDIISGIMIHCKVFV 117

Query: 531 DEISRIQIFHNSIKLDLDGLATLRVRAFD 617
           D+ISRI IFH+++K+DLD +ATLRV AFD
Sbjct: 118 DKISRISIFHHAVKIDLDEIATLRVHAFD 146



 Score = 58.2 bits (139), Expect(2) = 8e-42
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +1

Query: 253 NSITGPHIADVNILLPPRMTHPVEYLLLGSDGCFS 357
           N   GPH+AD+++LLPPRMT PVEY L+G DGCFS
Sbjct: 25  NPAGGPHMADLSVLLPPRMTKPVEYRLIGGDGCFS 59


>tpg|DAA39634.1| TPA: hypothetical protein ZEAMMB73_857219, partial [Zea mays]
          Length = 392

 Score =  137 bits (345), Expect(2) = 1e-41
 Identities = 60/89 (67%), Positives = 78/89 (87%)
 Frame = +3

Query: 351 FFMSWDHHDILSLQPEYNASNRCSTSARLRSIAPYEGRQETAIYATDLRTGIVIRCKVFI 530
           F  SWDHHD++S++PEYN S+RCSTSARL SIAPY GR+ET++YATD+ +GI I CKVF+
Sbjct: 58  FSWSWDHHDLISVKPEYNDSSRCSTSARLASIAPYSGRRETSVYATDIISGITIHCKVFV 117

Query: 531 DEISRIQIFHNSIKLDLDGLATLRVRAFD 617
           D+ISRI IFH+++K+DLD +ATLR+ AFD
Sbjct: 118 DKISRISIFHHAVKIDLDEIATLRIHAFD 146



 Score = 58.2 bits (139), Expect(2) = 1e-41
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +1

Query: 253 NSITGPHIADVNILLPPRMTHPVEYLLLGSDGCFS 357
           N   GPH+AD+++LLPPRMT PVEY L+G DGCFS
Sbjct: 25  NPAGGPHMADLSVLLPPRMTKPVEYRLIGGDGCFS 59


>gb|EEC85075.1| hypothetical protein OsI_32422 [Oryza sativa Indica Group]
          Length = 1924

 Score =  137 bits (344), Expect(2) = 3e-40
 Identities = 61/89 (68%), Positives = 78/89 (87%)
 Frame = +3

Query: 351 FFMSWDHHDILSLQPEYNASNRCSTSARLRSIAPYEGRQETAIYATDLRTGIVIRCKVFI 530
           F  +WDHHDI+S++PEYN S+RCSTSARL SIAPY GR+ET++YATD+ +GI I CKVF+
Sbjct: 66  FTWAWDHHDIISVKPEYNDSSRCSTSARLASIAPYSGRKETSVYATDIISGITIHCKVFV 125

Query: 531 DEISRIQIFHNSIKLDLDGLATLRVRAFD 617
           D ISRI+IFH+++K+DLD +ATLRV AFD
Sbjct: 126 DRISRIRIFHHAVKIDLDEVATLRVHAFD 154



 Score = 53.9 bits (128), Expect(2) = 3e-40
 Identities = 21/33 (63%), Positives = 29/33 (87%)
 Frame = +1

Query: 259 ITGPHIADVNILLPPRMTHPVEYLLLGSDGCFS 357
           + GPH+AD+++LLPPRMT PVE+ L+G DGCF+
Sbjct: 35  VGGPHMADLSVLLPPRMTKPVEHRLIGVDGCFT 67


>gb|EEE70249.1| hypothetical protein OsJ_30371 [Oryza sativa Japonica Group]
          Length = 1870

 Score =  137 bits (344), Expect(2) = 3e-40
 Identities = 61/89 (68%), Positives = 78/89 (87%)
 Frame = +3

Query: 351 FFMSWDHHDILSLQPEYNASNRCSTSARLRSIAPYEGRQETAIYATDLRTGIVIRCKVFI 530
           F  +WDHHDI+S++PEYN S+RCSTSARL SIAPY GR+ET++YATD+ +GI I CKVF+
Sbjct: 50  FTWAWDHHDIISVKPEYNDSSRCSTSARLASIAPYSGRKETSVYATDIISGITIHCKVFV 109

Query: 531 DEISRIQIFHNSIKLDLDGLATLRVRAFD 617
           D ISRI+IFH+++K+DLD +ATLRV AFD
Sbjct: 110 DRISRIRIFHHAVKIDLDEVATLRVHAFD 138



 Score = 53.9 bits (128), Expect(2) = 3e-40
 Identities = 21/33 (63%), Positives = 29/33 (87%)
 Frame = +1

Query: 259 ITGPHIADVNILLPPRMTHPVEYLLLGSDGCFS 357
           + GPH+AD+++LLPPRMT PVE+ L+G DGCF+
Sbjct: 19  VGGPHMADLSVLLPPRMTKPVEHRLIGFDGCFT 51


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