BLASTX nr result

ID: Cimicifuga21_contig00038657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038657
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ74044.1| cytoplasmic male sterility-associated protein [Ca...    73   2e-11
gb|AAZ76183.1| cytoplasmic male sterility-associated protein [Ca...    66   3e-09

>gb|ACJ74044.1| cytoplasmic male sterility-associated protein [Capsicum annuum]
           gi|284931843|gb|ADC31719.1| cytoplasmic male
           sterility-associated protein [Capsicum annuum]
           gi|310645226|gb|ADP02161.1| cytoplasmic male
           sterility-associated protein [Capsicum annuum]
          Length = 168

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
 Frame = +3

Query: 111 AGQVFERSTIACTERIHNLEKLKQKTEAKLDILWKQYCDTHGNMQLP----ERPRFKDIV 278
           AG+ FERS +        LEK+K KTEA+L  L +++   +  +QLP          D +
Sbjct: 61  AGRFFERSEVLQELENFQLEKIKLKTEAELQFLCREHLRMNEELQLPVPDGTSMHISDFL 120

Query: 279 EHAFIIDENIKDQILGLNQIYLDLISNGTGSLYFIKVLETYGH 407
             AF++DE ++++ILGL QIY+DL +NG  S +F+  L+ Y +
Sbjct: 121 GKAFLVDETVRERILGLTQIYMDLKNNGATSNFFLLFLDYYSN 163


>gb|AAZ76183.1| cytoplasmic male sterility-associated protein [Capsicum annuum]
          Length = 151

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
 Frame = +3

Query: 111 AGQVFERSTIACTERIHNLEKLKQKTEAKLDILWKQYCDTHGNMQLP----ERPRFKDIV 278
           AG+ FERS +        LEK+K KTEA+L  L +++   +  +QLP          D +
Sbjct: 61  AGRFFERSEVLQELENFQLEKIKLKTEAELQFLCREHLRMNEELQLPVPDGTSMHISDFL 120

Query: 279 EHAFIIDENIKDQILGLNQIYLDLISNG 362
             AF++DE ++++ILGL QIY+DL +NG
Sbjct: 121 GKAFLVDETVRERILGLTQIYMDLKNNG 148


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