BLASTX nr result

ID: Cimicifuga21_contig00038654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038654
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135391.1| PREDICTED: uncharacterized protein LOC101209...    82   5e-14
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    55   8e-06

>ref|XP_004135391.1| PREDICTED: uncharacterized protein LOC101209996 [Cucumis sativus]
          Length = 416

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/100 (43%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
 Frame = +3

Query: 9   LGDRVLFIGSSGSASFSTKDLGGDTSNCIFFSNDYFAPGANEWTRRDCR--RDAFSPRPC 182
           L DR+LF+G   S S S+ DLG   SN I+FSND  AP  NEW     +     F     
Sbjct: 306 LDDRILFLGKCCSRSLSSTDLGILISNRIYFSNDDMAPWWNEWDSNHLKVVSSRFGLNNS 365

Query: 183 TFRDWGAFSLDRNCFIPNSCNRGDPDSWPPIWITAPFWWY 302
           + +DWG F + R+      C  G+ D+W PIW TAP WWY
Sbjct: 366 SGKDWGTFHIIRDS-SGKFCFHGNRDNWGPIWFTAPLWWY 404


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
 Frame = +3

Query: 3   DTLGDRVLFIGSSGSASFSTKDLGGDTSNCIFFSNDYFAPGANEWTRRDCRRDAFSPRPC 182
           +TLG+RVLF+G + S SF   D  G +++CI+F++DY     ++               C
Sbjct: 306 ETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSESNDDD--------------AC 351

Query: 183 TFRDWGAFSL-DRN-----CFIPNSCNRGDPDSWP-PIWIT 284
              D G F L D++     CF  NSC+R     WP PIW++
Sbjct: 352 GKHDLGVFRLRDKSIEPLPCFNQNSCSR---LRWPLPIWVS 389


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