BLASTX nr result

ID: Cimicifuga21_contig00038640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038640
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276243.1| PREDICTED: uncharacterized protein At2g39910...    89   3e-16
emb|CAN71831.1| hypothetical protein VITISV_033607 [Vitis vinifera]    87   1e-15
ref|NP_565917.2| armadillo/beta-catenin-like repeats-containing ...    64   1e-08
dbj|BAC42748.1| unknown protein [Arabidopsis thaliana] gi|623216...    64   1e-08
ref|XP_002879832.1| expressed protein [Arabidopsis lyrata subsp....    62   5e-08

>ref|XP_002276243.1| PREDICTED: uncharacterized protein At2g39910 [Vitis vinifera]
           gi|296086104|emb|CBI31545.3| unnamed protein product
           [Vitis vinifera]
          Length = 446

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
 Frame = -2

Query: 254 MVKFSSDLRRDLVRLSESIRESLSKTKYNPPESTNISMKNLLESLLPNNTSEE------- 96
           M +  S L  +L+RLSE+I+ESLSK +YNP E TN+S+K++LESLLP  TS         
Sbjct: 1   MAEALSTLHDNLIRLSETIQESLSKAQYNPEEGTNVSVKSMLESLLPRKTSISNRTEGRR 60

Query: 95  --EDDINSEIRDFCLCCAALASAEGEKEDTL 9
             ED I  EI+DF LCCAALASA+G    +L
Sbjct: 61  ITEDQIECEIKDFSLCCAALASAQGSNHASL 91


>emb|CAN71831.1| hypothetical protein VITISV_033607 [Vitis vinifera]
          Length = 399

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 9/91 (9%)
 Frame = -2

Query: 254 MVKFSSDLRRDLVRLSESIRESLSKTKYNPPESTNISMKNLLESLLPNNTSEE------- 96
           M +  S L  +L+ LSE+I+ESLSK +YNP E TN+S+K++LESLLP  TS         
Sbjct: 1   MAEALSXLHDNLIXLSETIQESLSKAQYNPEEGTNVSVKSMLESLLPRKTSISNRTEGRR 60

Query: 95  --EDDINSEIRDFCLCCAALASAEGEKEDTL 9
             ED I  EI+DF LCCAALASA+G    +L
Sbjct: 61  ITEDQIQCEIKDFSLCCAALASAQGSNHASL 91


>ref|NP_565917.2| armadillo/beta-catenin-like repeats-containing protein [Arabidopsis
           thaliana] gi|121957886|sp|Q8GXP4.2|Y2991_ARATH RecName:
           Full=Uncharacterized protein At2g39910
           gi|330254654|gb|AEC09748.1| armadillo/beta-catenin-like
           repeats-containing protein [Arabidopsis thaliana]
          Length = 436

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/83 (44%), Positives = 50/83 (60%)
 Frame = -2

Query: 257 KMVKFSSDLRRDLVRLSESIRESLSKTKYNPPESTNISMKNLLESLLPNNTSEEEDDINS 78
           KM+  SSDL   L+RLSE I E L +T+Y P ES+ +S K++L SLLPN +S    +  S
Sbjct: 12  KMLSTSSDLHGRLLRLSEPIAEILRRTQYTPQESSKVSTKDILLSLLPNTSSSRLANEES 71

Query: 77  EIRDFCLCCAALASAEGEKEDTL 9
            I+   L CA LAS+     + L
Sbjct: 72  -IKSLALACALLASSRSSTHELL 93


>dbj|BAC42748.1| unknown protein [Arabidopsis thaliana] gi|62321613|dbj|BAD95199.1|
           hypothetical protein [Arabidopsis thaliana]
          Length = 436

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/83 (44%), Positives = 50/83 (60%)
 Frame = -2

Query: 257 KMVKFSSDLRRDLVRLSESIRESLSKTKYNPPESTNISMKNLLESLLPNNTSEEEDDINS 78
           KM+  SSDL   L+RLSE I E L +T+Y P ES+ +S K++L SLLPN +S    +  S
Sbjct: 12  KMLSTSSDLHGRLLRLSEPIAEILRRTQYTPQESSKVSTKDILLSLLPNTSSSRLANEES 71

Query: 77  EIRDFCLCCAALASAEGEKEDTL 9
            I+   L CA LAS+     + L
Sbjct: 72  -IKSLALACALLASSRSSTHELL 93


>ref|XP_002879832.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325671|gb|EFH56091.1| expressed protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 424

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/82 (42%), Positives = 49/82 (59%)
 Frame = -2

Query: 254 MVKFSSDLRRDLVRLSESIRESLSKTKYNPPESTNISMKNLLESLLPNNTSEEEDDINSE 75
           M+  +SDL   L+RLSE I E L +T+Y P ES+ +S K++L SLLPN +S    +  S 
Sbjct: 1   MLSTNSDLHGQLLRLSEPIAEILRRTQYTPQESSKVSTKDILFSLLPNTSSSRLTNEES- 59

Query: 74  IRDFCLCCAALASAEGEKEDTL 9
           I+   L CA LAS+     + L
Sbjct: 60  IKSLALACALLASSRSSTHELL 81


Top