BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038638
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     83   3e-14
emb|CAN80421.1| hypothetical protein VITISV_008672 [Vitis vinifera]    70   2e-10
emb|CAN81103.1| hypothetical protein VITISV_003734 [Vitis vinifera]    70   2e-10
emb|CAN67690.1| hypothetical protein VITISV_010140 [Vitis vinifera]    70   2e-10
gb|ABG37668.1| gag protein [Populus trichocarpa]                       69   3e-10

>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/107 (40%), Positives = 61/107 (57%)
 Frame = +1

Query: 1   PIAPYPEHLLQGKNDQQYDNIQEVFQNITINISFL*AVKFFSLYSKYLKSLCTVKRQTDV 180
           P+AP+P+ L   KN  Q + I E F+ + INI  L A++    Y+K+LK LCT KR T+V
Sbjct: 458 PVAPFPDRLKPRKNSPQVEKILETFKQVKINIPLLDAIEQIPSYAKFLKDLCTKKRTTNV 517

Query: 181 L*DALLVEDASPLHRKMTS*SIMNPGRPTVPRISGDKYTSKALLDLG 321
                L  + S +  K       +PG PT+P + G+ +  KALLDLG
Sbjct: 518 PKKVFLAANLSEIFSKPMPLKYKDPGCPTIPCVIGNTHIDKALLDLG 564


>emb|CAN80421.1| hypothetical protein VITISV_008672 [Vitis vinifera]
          Length = 955

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/104 (36%), Positives = 57/104 (54%)
 Frame = +1

Query: 10   PYPEHLLQGKNDQQYDNIQEVFQNITINISFL*AVKFFSLYSKYLKSLCTVKRQTDVL*D 189
            P+P+ L   K  +    I EV + + +NI  L  +K    Y+K+LK LCT+KR+ +V   
Sbjct: 707  PFPQALHGKKGIKNASKILEVLRQVKVNIPLLDMIKQVPTYAKFLKDLCTIKRRLNVNKK 766

Query: 190  ALLVEDASPLHRKMTS*SIMNPGRPTVPRISGDKYTSKALLDLG 321
            A L+E  S + +  +     +PG PT+  + G K   KALLDLG
Sbjct: 767  AFLIEQVSAIIQSKSPLKYKDPGCPTISVMIGGKVVEKALLDLG 810


>emb|CAN81103.1| hypothetical protein VITISV_003734 [Vitis vinifera]
          Length = 1654

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/104 (37%), Positives = 57/104 (54%)
 Frame = +1

Query: 10  PYPEHLLQGKNDQQYDNIQEVFQNITINISFL*AVKFFSLYSKYLKSLCTVKRQTDVL*D 189
           P+P+ L   K       I EV + + +NI  L  +K  S Y+K+LK LCT+KR+ ++   
Sbjct: 141 PFPKALQSRKVVNNATEIFEVLKQVKVNIPLLDMIKQVSPYAKFLKDLCTMKRRLNINKK 200

Query: 190 ALLVEDASPLHRKMTS*SIMNPGRPTVPRISGDKYTSKALLDLG 321
           A L+E  S + +  T     +PG PT+    GD Y  K+LLDLG
Sbjct: 201 AFLIEQVSAIIQCKTPIKYKDPGCPTISVNIGDTYVEKSLLDLG 244


>emb|CAN67690.1| hypothetical protein VITISV_010140 [Vitis vinifera]
          Length = 1766

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
 Frame = +1

Query: 10  PYPEHLLQGKNDQQYDNIQEVFQNITINISFL*AVKFFSLYSKYLKSLCTVKRQTDVL*D 189
           P+P+ L   K  +    I EV + + +NI  L  +K    Y+K+LK LCT+KR   V   
Sbjct: 515 PFPQALHGKKGIRNASEILEVLRQVKVNIPLLDMIKQVPTYAKFLKDLCTIKRGLPVNKK 574

Query: 190 ALLVEDASPLHRKMTS*SIMNPGRPTVPRISGDKYTSKALLDLG----------YLELCL 339
           A L E  S + +  +     +PG PT+  + G+K   KALLDLG          Y +L L
Sbjct: 575 AFLTEQVSAILQCKSPLKYKDPGSPTISVMIGEKVVEKALLDLGASVNLLPYSVYKQLGL 634

Query: 340 TNLKSMRI 363
             LK M I
Sbjct: 635 GELKPMAI 642


>gb|ABG37668.1| gag protein [Populus trichocarpa]
          Length = 1886

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/107 (35%), Positives = 56/107 (52%)
 Frame = +1

Query: 1   PIAPYPEHLLQGKNDQQYDNIQEVFQNITINISFL*AVKFFSLYSKYLKSLCTVKRQTDV 180
           P  P+P  + + +       I E F+ + INI  L A+K    Y+K+LK LCTVKR+ +V
Sbjct: 245 PALPFPHAMSKQRKVNHNSEILETFKQVRINIPLLDAIKQVPSYAKFLKDLCTVKRKLNV 304

Query: 181 L*DALLVEDASPLHRKMTS*SIMNPGRPTVPRISGDKYTSKALLDLG 321
              A L E  S + +   +    +PG PT+    G+    +ALLDLG
Sbjct: 305 KKKAFLAEQVSAILQNNNALKYKDPGCPTISCFIGEHKIERALLDLG 351