BLASTX nr result

ID: Cimicifuga21_contig00038636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038636
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157888.1| PREDICTED: mitochondrial import inner membra...    60   2e-07
ref|XP_004141020.1| PREDICTED: LOW QUALITY PROTEIN: mitochondria...    60   2e-07
gb|ABA81866.1| unknown [Solanum tuberosum]                             59   4e-07
ref|XP_002329674.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002335882.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_004157888.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Cucumis sativus]
          Length = 237

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/64 (50%), Positives = 38/64 (59%)
 Frame = +3

Query: 3   LIGGLQAARMNALRLGNGAAVVCSLCSAF*CTMIYLRQKEDP*NEIVXXXXXXXXXXXXR 182
           +IGG QA RMNA R+G   AV   L SAF CTM+Y+RQKEDP N I+            +
Sbjct: 48  IIGGTQAVRMNAPRVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQ 107

Query: 183 GPFS 194
           GP S
Sbjct: 108 GPAS 111


>ref|XP_004141020.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial import inner membrane
           translocase subunit Tim17-like [Cucumis sativus]
          Length = 211

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/64 (50%), Positives = 38/64 (59%)
 Frame = +3

Query: 3   LIGGLQAARMNALRLGNGAAVVCSLCSAF*CTMIYLRQKEDP*NEIVXXXXXXXXXXXXR 182
           +IGG QA RMNA R+G   AV   L SAF CTM+Y+RQKEDP N I+            +
Sbjct: 48  IIGGTQAVRMNAPRVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQ 107

Query: 183 GPFS 194
           GP S
Sbjct: 108 GPAS 111


>gb|ABA81866.1| unknown [Solanum tuberosum]
          Length = 236

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/47 (63%), Positives = 33/47 (70%)
 Frame = +3

Query: 3   LIGGLQAARMNALRLGNGAAVVCSLCSAF*CTMIYLRQKEDP*NEIV 143
           LIGG QA RMNA R+G   AV   L S F CTM+YLRQKEDP N I+
Sbjct: 48  LIGGTQAVRMNAPRIGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSII 94


>ref|XP_002329674.1| predicted protein [Populus trichocarpa] gi|222870555|gb|EEF07686.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/47 (63%), Positives = 34/47 (72%)
 Frame = +3

Query: 3   LIGGLQAARMNALRLGNGAAVVCSLCSAF*CTMIYLRQKEDP*NEIV 143
           LIGG QA RMNA R+G   AV   L SAF C+M+YLRQKEDP N I+
Sbjct: 48  LIGGTQAVRMNAPRVGGSFAVWGGLFSAFDCSMVYLRQKEDPWNSII 94


>ref|XP_002335882.1| predicted protein [Populus trichocarpa] gi|222836174|gb|EEE74595.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/47 (63%), Positives = 34/47 (72%)
 Frame = +3

Query: 3   LIGGLQAARMNALRLGNGAAVVCSLCSAF*CTMIYLRQKEDP*NEIV 143
           LIGG QA RMNA R+G   AV   L SAF C+M+YLRQKEDP N I+
Sbjct: 48  LIGGTQAVRMNAPRVGGSFAVWGGLFSAFDCSMVYLRQKEDPWNSII 94


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