BLASTX nr result

ID: Cimicifuga21_contig00038536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038536
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18975.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_002284588.1| PREDICTED: probable receptor-like protein ki...    86   4e-15
ref|XP_003547530.1| PREDICTED: probable receptor-like protein ki...    78   6e-13
ref|XP_004166968.1| PREDICTED: LOW QUALITY PROTEIN: probable rec...    78   8e-13
ref|XP_004146288.1| PREDICTED: probable receptor-like protein ki...    78   8e-13

>emb|CBI18975.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = -2

Query: 234 MGTMVMQVSF---LSLAVAMTSISSSPCPMDLSYVQRIPWNTSVCPNKTTHSCCQALLSL 64
           MGT V  +SF   LSL V     +SS CP+DL YV+  PW+TS C +     CC ALLSL
Sbjct: 1   MGTFVFLISFIVSLSLFVFSVDSASSSCPIDLGYVETYPWDTSSCRDGDQDHCCMALLSL 60

Query: 63  FGIGLSLHLKHTSLFQLP 10
           FG+GL+ HLK TS+FQLP
Sbjct: 61  FGMGLAQHLKETSMFQLP 78


>ref|XP_002284588.1| PREDICTED: probable receptor-like protein kinase At1g11050 [Vitis
           vinifera]
          Length = 612

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = -2

Query: 234 MGTMVMQVSF---LSLAVAMTSISSSPCPMDLSYVQRIPWNTSVCPNKTTHSCCQALLSL 64
           MGT V  +SF   LSL V     +SS CP+DL YV+  PW+TS C +     CC ALLSL
Sbjct: 1   MGTFVFLISFIVSLSLFVFSVDSASSSCPIDLGYVETYPWDTSSCRDGDQDHCCMALLSL 60

Query: 63  FGIGLSLHLKHTSLFQLP 10
           FG+GL+ HLK TS+FQLP
Sbjct: 61  FGMGLAQHLKETSMFQLP 78


>ref|XP_003547530.1| PREDICTED: probable receptor-like protein kinase At1g11050-like
           [Glycine max]
          Length = 642

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 10/84 (11%)
 Frame = -2

Query: 225 MVMQVSFLSLAVAMTSISSSPCPMDLSYVQRIPWNTSVCPN----------KTTHSCCQA 76
           M++     +L    +S +++ CPMDL+YV RIPWNTS C N             ++CC +
Sbjct: 1   MLLLPLMFALFSCTSSANTTTCPMDLNYVLRIPWNTSACHNFQQTLAAKNGTDANTCCIS 60

Query: 75  LLSLFGIGLSLHLKHTSLFQLPDL 4
           LLSLFGIGL+ HLK TS FQLP+L
Sbjct: 61  LLSLFGIGLAQHLKETSQFQLPNL 84


>ref|XP_004166968.1| PREDICTED: LOW QUALITY PROTEIN: probable receptor-like protein
           kinase At1g11050-like [Cucumis sativus]
          Length = 649

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 13/76 (17%)
 Frame = -2

Query: 189 AMTSISSSPCPMDLSYVQRIPWNTSVCPN---KTTHS----------CCQALLSLFGIGL 49
           A T I++  CPMDL+Y+ RIPWN + C N   +TT            CCQ LLSLFGI L
Sbjct: 21  AATPIANPICPMDLNYILRIPWNATDCQNPFFQTTAQSAMNDTSKIPCCQTLLSLFGIAL 80

Query: 48  SLHLKHTSLFQLPDLP 1
           + HLK TSLF LPDLP
Sbjct: 81  AQHLKETSLFNLPDLP 96


>ref|XP_004146288.1| PREDICTED: probable receptor-like protein kinase At1g11050-like
           [Cucumis sativus]
          Length = 726

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 13/76 (17%)
 Frame = -2

Query: 189 AMTSISSSPCPMDLSYVQRIPWNTSVCPN---KTTHS----------CCQALLSLFGIGL 49
           A T I++  CPMDL+Y+ RIPWN + C N   +TT            CCQ LLSLFGI L
Sbjct: 98  AATPIANPICPMDLNYILRIPWNATDCQNPFFQTTAQSAMNDTSKIPCCQTLLSLFGIAL 157

Query: 48  SLHLKHTSLFQLPDLP 1
           + HLK TSLF LPDLP
Sbjct: 158 AQHLKETSLFNLPDLP 173


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