BLASTX nr result

ID: Cimicifuga21_contig00038517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038517
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80322.1| hypothetical protein VITISV_021000 [Vitis vinifera]    62   5e-08
emb|CAN68860.1| hypothetical protein VITISV_023024 [Vitis vinifera]    62   6e-08
emb|CAN74843.1| hypothetical protein VITISV_037042 [Vitis vinifera]    61   1e-07
emb|CAN60781.1| hypothetical protein VITISV_022451 [Vitis vinifera]    61   1e-07
emb|CAN69430.1| hypothetical protein VITISV_024658 [Vitis vinifera]    60   1e-07

>emb|CAN80322.1| hypothetical protein VITISV_021000 [Vitis vinifera]
          Length = 340

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/84 (45%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = -3

Query: 246 PIFTSSLFSIPKGWSVGSSASFRTFC--GLTLRRAP*VPLVDWDLVCLSKKDGGLGLRNL 73
           P +  SLF IPK          R F   G  L   P   LV W ++C +KKDGGLG+RNL
Sbjct: 153 PTYFLSLFVIPKKVCTRLEKIQRDFLWGGGALENKP--HLVSWKVICAAKKDGGLGIRNL 210

Query: 72  Q*FNVALWRKWLRRFRRVSLSLWR 1
             FN AL  KWL RF   + SLW+
Sbjct: 211 AIFNKALLGKWLWRFANENESLWK 234


>emb|CAN68860.1| hypothetical protein VITISV_023024 [Vitis vinifera]
          Length = 1795

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/84 (45%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = -3

Query: 246  PIFTSSLFSIPKGWSVGSSASFRTFC--GLTLRRAP*VPLVDWDLVCLSKKDGGLGLRNL 73
            P +  SLF IPK          R F   G  L   P   LV W ++C +KKDGGLG+RNL
Sbjct: 1388 PTYFLSLFVIPKRVCARLEKIQRDFLWGGGALENKP--HLVCWKVICAAKKDGGLGIRNL 1445

Query: 72   Q*FNVALWRKWLRRFRRVSLSLWR 1
              FN AL  KWL RF   + SLW+
Sbjct: 1446 AIFNKALLGKWLWRFANENXSLWK 1469


>emb|CAN74843.1| hypothetical protein VITISV_037042 [Vitis vinifera]
          Length = 1296

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/84 (45%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = -3

Query: 246  PIFTSSLFSIPKGWSVGSSASFRTFC--GLTLRRAP*VPLVDWDLVCLSKKDGGLGLRNL 73
            P +  SLF IPK          R F   G  L   P   LV W ++C +KKDGGLG+RNL
Sbjct: 889  PTYFLSLFVIPKRVCARLEKIQRDFLWGGGALENKP--HLVCWKVICAAKKDGGLGIRNL 946

Query: 72   Q*FNVALWRKWLRRFRRVSLSLWR 1
              FN AL  KWL RF   + SLW+
Sbjct: 947  AIFNKALLGKWLWRFANENESLWK 970


>emb|CAN60781.1| hypothetical protein VITISV_022451 [Vitis vinifera]
          Length = 562

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/84 (45%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = -3

Query: 246 PIFTSSLFSIPKGWSVGSSASFRTFC--GLTLRRAP*VPLVDWDLVCLSKKDGGLGLRNL 73
           P +  SLF IPK          R F   G  L   P   LV W ++C +KKDGGLG+RNL
Sbjct: 197 PTYFISLFVIPKRVCAKLEKIQRDFLWGGGALGNKP--HLVSWKVICTAKKDGGLGIRNL 254

Query: 72  Q*FNVALWRKWLRRFRRVSLSLWR 1
             FN AL  KWL RF   + SLW+
Sbjct: 255 AIFNNALLGKWLWRFANENESLWK 278


>emb|CAN69430.1| hypothetical protein VITISV_024658 [Vitis vinifera]
          Length = 1998

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 38/84 (45%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = -3

Query: 246  PIFTSSLFSIPKGWSVGSSASFRTFC--GLTLRRAP*VPLVDWDLVCLSKKDGGLGLRNL 73
            P +  SLF IPK          R F   G  L   P   LV W ++C +KKDGGLG+RNL
Sbjct: 1591 PTYFLSLFVIPKRVCARLEKIQRDFLWGGGALENKP--HLVCWKVICAAKKDGGLGIRNL 1648

Query: 72   Q*FNVALWRKWLRRFRRVSLSLWR 1
              FN AL  KWL RF   + SLW+
Sbjct: 1649 XIFNKALLGKWLWRFANENDSLWK 1672


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