BLASTX nr result

ID: Cimicifuga21_contig00038477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038477
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002328069.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_002310299.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [V...    94   1e-17
emb|CBI30256.3| unnamed protein product [Vitis vinifera]               94   1e-17

>ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|222833186|gb|EEE71663.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
 Frame = -3

Query: 298 LDSMETKIQQMPSLFHRQVGSS---ISRVPQKLVEVNKKAYKPEIVSIGPYHHGEAHLEM 128
           L S+E K + +P L  +  G S   I RVPQ LVE+NKKAY P IVSIGPYHHG+ HL+M
Sbjct: 34  LKSVEKKTKLLPKLLKKSAGKSSCCIFRVPQSLVEINKKAYHPHIVSIGPYHHGKVHLKM 93

Query: 127 FEKHKWQYLKTHLSRSLDPG-GLEYYLNWIKSMETKIRESYSD 2
            E+HKW++L   L+R+   G G+  +   I  +E KIR+ YS+
Sbjct: 94  IEEHKWRFLGGVLARTQQHGIGINDFFKAIAPIEEKIRDCYSE 136


>ref|XP_002328069.1| predicted protein [Populus trichocarpa] gi|222837584|gb|EEE75949.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/103 (48%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
 Frame = -3

Query: 298 LDSMETKIQQMPSLFHRQVGSS---ISRVPQKLVEVNKKAYKPEIVSIGPYHHGEAHLEM 128
           L S+ETK + +P L +   G S   I RVPQ L E+NK AY+P IVSIGPYHHG+ HL+M
Sbjct: 34  LKSVETKTKLLPKLLNNSAGKSSCCIFRVPQSLFEINKMAYQPHIVSIGPYHHGKVHLKM 93

Query: 127 FEKHKWQYLKTHLSRSLDPG-GLEYYLNWIKSMETKIRESYSD 2
            E+HKW++L   L+R+   G G+  +   I  +E KIR+ YS+
Sbjct: 94  IEEHKWRFLGGVLARTQQHGIGINDFFKAIAPIEEKIRDCYSE 136


>ref|XP_002310299.1| predicted protein [Populus trichocarpa] gi|222853202|gb|EEE90749.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/99 (49%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
 Frame = -3

Query: 289 METKIQQMPSLFHRQVGSS---ISRVPQKLVEVNKKAYKPEIVSIGPYHHGEAHLEMFEK 119
           M  KI   P L  +   +S   I +VPQ+ +++N K+Y+P IVSIGPYHHGEAHL M E+
Sbjct: 1   MRQKISDPPRLLTKAAANSSCCIFKVPQRFIDINGKSYQPHIVSIGPYHHGEAHLRMIEE 60

Query: 118 HKWQYLKTHLSRSLDPG-GLEYYLNWIKSMETKIRESYS 5
           HKW YL + LSR+ + G  LE  L  I+ +E K RE YS
Sbjct: 61  HKWGYLGSMLSRTQNNGLDLEVLLRAIQPLEMKARECYS 99


>ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 442

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/103 (45%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
 Frame = -3

Query: 298 LDSMETKIQQMPSLFHRQVGSS---ISRVPQKLVEVNKKAYKPEIVSIGPYHHGEAHLEM 128
           L  M+ KI + P L  +  G S   I RVP+ LVE+N ++Y+P I+SIGPYH GE HL+M
Sbjct: 21  LARMQQKISEEPRLLRKSAGRSSCCIFRVPRTLVEINSRSYQPHIISIGPYHRGEPHLKM 80

Query: 127 FEKHKWQYLKTHLSRSLDPG-GLEYYLNWIKSMETKIRESYSD 2
            E+HKW YL + ++R+   G GL+ YL  ++ +E + RE YS+
Sbjct: 81  IEEHKWLYLGSLIARTQRHGLGLQDYLRALQPLEMEARECYSE 123


>emb|CBI30256.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/103 (45%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
 Frame = -3

Query: 298 LDSMETKIQQMPSLFHRQVGSS---ISRVPQKLVEVNKKAYKPEIVSIGPYHHGEAHLEM 128
           L  M+ KI + P L  +  G S   I RVP+ LVE+N ++Y+P I+SIGPYH GE HL+M
Sbjct: 20  LARMQQKISEEPRLLRKSAGRSSCCIFRVPRTLVEINSRSYQPHIISIGPYHRGEPHLKM 79

Query: 127 FEKHKWQYLKTHLSRSLDPG-GLEYYLNWIKSMETKIRESYSD 2
            E+HKW YL + ++R+   G GL+ YL  ++ +E + RE YS+
Sbjct: 80  IEEHKWLYLGSLIARTQRHGLGLQDYLRALQPLEMEARECYSE 122


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