BLASTX nr result

ID: Cimicifuga21_contig00038444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038444
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68159.1| hypothetical protein VITISV_006519 [Vitis vinifera]    75   7e-12
emb|CBI25075.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002522045.1| conserved hypothetical protein [Ricinus comm...    55   4e-06

>emb|CAN68159.1| hypothetical protein VITISV_006519 [Vitis vinifera]
          Length = 789

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/87 (49%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   VVAKTLVFNTPKKSESSKCLLQTETPMTEICDGMKMLQINSQRKKLSWNSGKSSRCTAAC 181
           VVAK LVF++PKK    K  L+  TP+++IC GMK L+I SQRK++   S KSSR     
Sbjct: 175 VVAKALVFHSPKKPRQKKTSLELHTPVSKICQGMKQLEITSQRKRVLGYSVKSSRDIERD 234

Query: 182 PKKSRTTSDPSTSKLYSQKLKSRVKDS 262
           P K +  SD S  K  ++K+KSRV DS
Sbjct: 235 PNK-QLPSDTSRRKFGTRKVKSRVYDS 260


>emb|CBI25075.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = +2

Query: 2   VVAKTLVFNTPKKSESSKCLLQTETPMTEICDGMKMLQINSQRKKLSWNSGKSSRC 169
           VVAK LVF++PKK    K  L+  TP+++IC GMK L+I SQRK+      KSSRC
Sbjct: 175 VVAKALVFHSPKKPRQKKTSLELHTPVSKICQGMKQLEITSQRKQ-----DKSSRC 225


>ref|XP_002522045.1| conserved hypothetical protein [Ricinus communis]
           gi|223538644|gb|EEF40245.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 694

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
 Frame = +2

Query: 2   VVAKTLVFNTPKKSESSKCLLQTETPMTEICDGMKMLQINSQRKKLSWNSGKSSRCTAAC 181
           +VAK LVF++PKKS  +K  ++ +TP+  +CDGMK L+I   +K+               
Sbjct: 190 LVAKALVFHSPKKSVKTKSSIELKTPVKTLCDGMKKLEITGAKKQ------------RLG 237

Query: 182 PKKSRTTSDPSTSKLYSQKLKSRVKD---SKDHKDQG 283
           P K    SD S  +L  +++KSRV D   S++HK  G
Sbjct: 238 PNKP-LPSDTSRKQLRGREVKSRVFDGLLSQNHKVNG 273


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