BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038393
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523294.1| pentatricopeptide repeat-containing protein,...   135   4e-30
ref|XP_002317747.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi...   132   4e-29
emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]   132   4e-29
ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containi...   127   9e-28

>ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537382|gb|EEF39010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 544

 Score =  135 bits (339), Expect = 4e-30
 Identities = 57/78 (73%), Positives = 72/78 (92%)
 Frame = +2

Query: 2   ARGDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDI 181
           +RGD+V A KVF E+ DRGW+PDATTYT+LMNG+C+QGRL +AIK+MDDM ENG+EPN++
Sbjct: 248 SRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEV 307

Query: 182 TYGVMIEAFCKEKKSGEA 235
           TYGVM+EA+CKEKK+GEA
Sbjct: 308 TYGVMVEAYCKEKKAGEA 325



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/76 (39%), Positives = 50/76 (65%)
 Frame = +2

Query: 5   RGDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDIT 184
           +G+L  A K++D+++++G+ P+A TY +L+ GF K G   E I+I+++M +N   PN  T
Sbjct: 423 KGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKST 482

Query: 185 YGVMIEAFCKEKKSGE 232
           Y ++IE  CK    GE
Sbjct: 483 YAILIEELCKMGMEGE 498



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/77 (41%), Positives = 46/77 (59%)
 Frame = +2

Query: 8   GDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDITY 187
           G +  A+K+F E  +RG IP   TY  L+ G C++G L EA K+ DDM E G +PN  TY
Sbjct: 390 GKVWEARKLFGEF-ERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTY 448

Query: 188 GVMIEAFCKEKKSGEAL 238
            ++I+ F K   + E +
Sbjct: 449 NMLIKGFSKIGNAKEGI 465


>ref|XP_002317747.1| predicted protein [Populus trichocarpa] gi|222858420|gb|EEE95967.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  132 bits (332), Expect = 3e-29
 Identities = 59/78 (75%), Positives = 72/78 (92%)
 Frame = +2

Query: 2   ARGDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDI 181
           +RGDLV A+KVF EI D+GW+PDATTYTVLM G+CKQGRL +AIK+MD+ME NG+EPN++
Sbjct: 205 SRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEV 264

Query: 182 TYGVMIEAFCKEKKSGEA 235
           TYGVMI+A+CKEKKSGEA
Sbjct: 265 TYGVMIDAYCKEKKSGEA 282



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/69 (42%), Positives = 42/69 (60%)
 Frame = +2

Query: 8   GDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDITY 187
           G +  A+K+FDE  ++G IP   TY  L+ G C++G L EA ++ DDM E    PN  TY
Sbjct: 347 GKVWEARKLFDEF-EQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTY 405

Query: 188 GVMIEAFCK 214
            ++I+ F K
Sbjct: 406 NMLIKGFMK 414



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/76 (34%), Positives = 49/76 (64%)
 Frame = +2

Query: 5   RGDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDIT 184
           RG+L  A +++D+++++   P+A TY +L+ GF K G + E ++I+++M +NG  PN  T
Sbjct: 380 RGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKST 439

Query: 185 YGVMIEAFCKEKKSGE 232
           Y ++IE   +    G+
Sbjct: 440 YTLLIEGLQESGMEGD 455


>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
           gi|296089757|emb|CBI39576.3| unnamed protein product
           [Vitis vinifera]
          Length = 586

 Score =  132 bits (331), Expect = 4e-29
 Identities = 54/79 (68%), Positives = 73/79 (92%)
 Frame = +2

Query: 2   ARGDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDI 181
           ++GD+V A++VF EILDRGW+PD TTYT+LM+G+CK+GR ++A+K+MD+MEEN +EPND+
Sbjct: 288 SKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDV 347

Query: 182 TYGVMIEAFCKEKKSGEAL 238
           TYGV+IEA+CKEKKSGE L
Sbjct: 348 TYGVIIEAYCKEKKSGEVL 366



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 28/75 (37%), Positives = 49/75 (65%)
 Frame = +2

Query: 8   GDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDITY 187
           G+L  A +++D ++++G +P+A TY +L+ GFCK G   E I++M++M +NG  PN  TY
Sbjct: 464 GELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523

Query: 188 GVMIEAFCKEKKSGE 232
            +++E   +    GE
Sbjct: 524 AILLEGLYELGLEGE 538



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/77 (40%), Positives = 46/77 (59%)
 Frame = +2

Query: 8   GDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDITY 187
           G +  A+K+FDE  ++G IP   TY  L+ G C+ G L EA ++ D+M E G  PN  TY
Sbjct: 430 GKVWEARKLFDEF-EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTY 488

Query: 188 GVMIEAFCKEKKSGEAL 238
            ++I+ FCK   + E +
Sbjct: 489 NMLIKGFCKVGNAREGI 505


>emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  132 bits (331), Expect = 4e-29
 Identities = 54/79 (68%), Positives = 73/79 (92%)
 Frame = +2

Query: 2   ARGDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDI 181
           ++GD+V A++VF EILDRGW+PD TTYT+LM+G+CK+GR ++A+K+MD+MEEN +EPND+
Sbjct: 288 SKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDV 347

Query: 182 TYGVMIEAFCKEKKSGEAL 238
           TYGV+IEA+CKEKKSGE L
Sbjct: 348 TYGVIIEAYCKEKKSGEVL 366



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 28/75 (37%), Positives = 49/75 (65%)
 Frame = +2

Query: 8   GDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDITY 187
           G+L  A +++D ++++G +P+A TY +L+ GFCK G   E I++M++M +NG  PN  TY
Sbjct: 464 GELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523

Query: 188 GVMIEAFCKEKKSGE 232
            +++E   +    GE
Sbjct: 524 AILLEGLYELGLEGE 538



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/77 (40%), Positives = 46/77 (59%)
 Frame = +2

Query: 8   GDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDITY 187
           G +  A+K+FDE  ++G IP   TY  L+ G C+ G L EA ++ D+M E G  PN  TY
Sbjct: 430 GKVWEARKLFDEF-EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTY 488

Query: 188 GVMIEAFCKEKKSGEAL 238
            ++I+ FCK   + E +
Sbjct: 489 NMLIKGFCKVGNAREGI 505


>ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
           gi|449492939|ref|XP_004159147.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  127 bits (319), Expect = 9e-28
 Identities = 53/79 (67%), Positives = 70/79 (88%)
 Frame = +2

Query: 2   ARGDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDI 181
           +RGD++ AK+VF E+ D GW+PDATTYT+LM+G+ KQGR  +A+K+MD+MEENG+EPNDI
Sbjct: 239 SRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDI 298

Query: 182 TYGVMIEAFCKEKKSGEAL 238
           TYGV+I  +CKE+KSGEAL
Sbjct: 299 TYGVIILGYCKERKSGEAL 317



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/77 (40%), Positives = 47/77 (61%)
 Frame = +2

Query: 8   GDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDITY 187
           G++  A+K+F+E  +RG I    TY  L+ G C+ G L EA ++ DDM E G  PN+ TY
Sbjct: 381 GNIWEARKLFNEF-ERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTY 439

Query: 188 GVMIEAFCKEKKSGEAL 238
            ++I+ F K  K+ E +
Sbjct: 440 NMLIKGFLKVGKAKEVI 456



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/77 (35%), Positives = 49/77 (63%)
 Frame = +2

Query: 8   GDLVAAKKVFDEILDRGWIPDATTYTVLMNGFCKQGRLIEAIKIMDDMEENGIEPNDITY 187
           G+L  A +++D++L++G +P+  TY +L+ GF K G+  E IK++++M + G   N+ TY
Sbjct: 415 GELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTY 474

Query: 188 GVMIEAFCKEKKSGEAL 238
            +++E   K  K  E L
Sbjct: 475 LILVEGLLKLGKREELL 491