BLASTX nr result

ID: Cimicifuga21_contig00038329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038329
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556930.1| PREDICTED: uncharacterized protein LOC100805...    65   6e-09
ref|XP_003536849.1| PREDICTED: uncharacterized protein LOC100817...    64   1e-08
ref|XP_002529313.1| hypothetical protein RCOM_0492410 [Ricinus c...    63   2e-08
ref|XP_002271297.1| PREDICTED: uncharacterized protein LOC100247...    60   2e-07
dbj|BAE98787.1| hypothetical protein [Arabidopsis thaliana]            58   7e-07

>ref|XP_003556930.1| PREDICTED: uncharacterized protein LOC100805617 [Glycine max]
          Length = 603

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/76 (42%), Positives = 49/76 (64%)
 Frame = -3

Query: 234 MAAKTWFSDIGNRVGNGVKKRTLVFESEKKHRSLFRPSQKYQTLGILAFETAKIMSRIVS 55
           M A+ W   +GN+V + +K   L+ E+  K +   + S   +T+GIL+FE A +MS+ V 
Sbjct: 1   MVAEAWIVKMGNQVSSNLK-HALLLETLTKRKQSHKRSDTKETIGILSFEVANVMSKTVH 59

Query: 54  LHKSLSDDEVSKLRKE 7
           LH+SLS+ E+SKLR E
Sbjct: 60  LHRSLSESEISKLRNE 75


>ref|XP_003536849.1| PREDICTED: uncharacterized protein LOC100817480 [Glycine max]
          Length = 602

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/76 (42%), Positives = 49/76 (64%)
 Frame = -3

Query: 234 MAAKTWFSDIGNRVGNGVKKRTLVFESEKKHRSLFRPSQKYQTLGILAFETAKIMSRIVS 55
           M A+ W   +GN+V + +K   L+ E+  K +   + S   +T+GIL+FE A +MS+ V 
Sbjct: 1   MVAEAWIVKMGNQVSSNLK-HALLLETLTKRKPNHKRSDTKETIGILSFEVANVMSKTVH 59

Query: 54  LHKSLSDDEVSKLRKE 7
           LH+SLS+ E+SKLR E
Sbjct: 60  LHRSLSESEISKLRNE 75


>ref|XP_002529313.1| hypothetical protein RCOM_0492410 [Ricinus communis]
           gi|223531237|gb|EEF33082.1| hypothetical protein
           RCOM_0492410 [Ricinus communis]
          Length = 588

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
 Frame = -3

Query: 234 MAAKTWFSDIGNRVGNGVKKRTLV--FESEKKHRSLFRPSQKYQTLGILAFETAKIMSRI 61
           M A+ W   +GN+V + +K+  L+  ++++K +      +++ +T+GIL+FE A +MS+ 
Sbjct: 1   MVAEAWILKMGNQVSSNLKQALLLETYKNKKNNPQRTDTAKERETIGILSFEVANVMSKT 60

Query: 60  VSLHKSLSDDEVSKLRKE 7
           V LHKSL+D EVSKL+ E
Sbjct: 61  VHLHKSLTDSEVSKLKVE 78


>ref|XP_002271297.1| PREDICTED: uncharacterized protein LOC100247764 [Vitis vinifera]
           gi|297740329|emb|CBI30511.3| unnamed protein product
           [Vitis vinifera]
          Length = 473

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/64 (51%), Positives = 41/64 (64%)
 Frame = -3

Query: 192 GNGVKKRTLVFESEKKHRSLFRPSQKYQTLGILAFETAKIMSRIVSLHKSLSDDEVSKLR 13
           G+   KR    +++K    L R      TLGILAFE AK MSR+ SL+KSLSDDE+ KLR
Sbjct: 6   GSSTLKRYATSDTKKSVCRLSRHDSPPNTLGILAFEAAKTMSRLFSLYKSLSDDEIFKLR 65

Query: 12  KETV 1
           KE +
Sbjct: 66  KEVM 69


>dbj|BAE98787.1| hypothetical protein [Arabidopsis thaliana]
          Length = 531

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/76 (39%), Positives = 47/76 (61%)
 Frame = -3

Query: 234 MAAKTWFSDIGNRVGNGVKKRTLVFESEKKHRSLFRPSQKYQTLGILAFETAKIMSRIVS 55
           M ++ W   + N+V + +K   L+ ES    ++    S   QT+GIL+FE A +MS+ + 
Sbjct: 1   MVSEAWIVKMRNQVSSNLK-HALLLESSSTKKTPKPVSLPKQTIGILSFEVANVMSKTIH 59

Query: 54  LHKSLSDDEVSKLRKE 7
           LH+SLSD E+SKL+ E
Sbjct: 60  LHRSLSDTEISKLKAE 75


Top