BLASTX nr result

ID: Cimicifuga21_contig00038323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038323
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60420.1| hypothetical protein VITISV_021068 [Vitis vinifera]    86   1e-25
emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera]    82   2e-25
emb|CAN78730.1| hypothetical protein VITISV_020014 [Vitis vinifera]    82   2e-25
emb|CAN77370.1| hypothetical protein VITISV_033119 [Vitis vinifera]    82   3e-25
emb|CAN65634.1| hypothetical protein VITISV_007119 [Vitis vinifera]    85   5e-25

>emb|CAN60420.1| hypothetical protein VITISV_021068 [Vitis vinifera]
          Length = 251

 Score = 85.9 bits (211), Expect(2) = 1e-25
 Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
 Frame = -1

Query: 351 YLSKGARIILLKSTMVSIPIYFLSLFQIP--AANELERLMRNFLWGTSSDWRRYHLVSWD 178
           Y+SKG RI L+KST+ SIPIY LSLFQ+P   A  LE+L R+FLWG     R+ HL++W+
Sbjct: 138 YISKGGRITLIKSTLASIPIYQLSLFQMPRLVAKRLEKLQRDFLWGGGRMERKIHLINWE 197

Query: 177 KVCTPKEMGGPG 142
            VCT KE GG G
Sbjct: 198 VVCTQKENGGLG 209



 Score = 55.8 bits (133), Expect(2) = 1e-25
 Identities = 23/50 (46%), Positives = 33/50 (66%)
 Frame = -2

Query: 164 QRKWGDLEIRRLVDMNEGMLTKWIWNFGIDDGRLWKKTIKAKYGSEGGSW 15
           Q++ G L IR++  +N+ +L+KWIW F  ++  LWKK I  KYG EG  W
Sbjct: 202 QKENGGLGIRKIDLLNKALLSKWIWRFAFEEDILWKKVIGVKYGQEGLGW 251


>emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera]
          Length = 2009

 Score = 82.4 bits (202), Expect(2) = 2e-25
 Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
 Frame = -1

Query: 351  YLSKGARIILLKSTMVSIPIYFLSLFQIPAA--NELERLMRNFLWGTSSDWRRYHLVSWD 178
            YLSKG RI L+KST+ SIPIY +S+F++P +    LE+L R+FLWG  +  R+ HLV+W 
Sbjct: 1695 YLSKGGRITLIKSTLASIPIYQMSIFRMPKSVVKRLEKLQRDFLWGGGNTGRKIHLVNWK 1754

Query: 177  KVCTPKEMGGPG 142
             VCT K+ GG G
Sbjct: 1755 VVCTQKDKGGLG 1766



 Score = 58.5 bits (140), Expect(2) = 2e-25
 Identities = 25/50 (50%), Positives = 32/50 (64%)
 Frame = -2

Query: 164  QRKWGDLEIRRLVDMNEGMLTKWIWNFGIDDGRLWKKTIKAKYGSEGGSW 15
            Q+  G L IRR+  +N+ +L KWIW F ++   LWKK I  KYG EGG W
Sbjct: 1759 QKDKGGLGIRRMGLLNKALLGKWIWRFAVEKDVLWKKVIGVKYGLEGGGW 1808


>emb|CAN78730.1| hypothetical protein VITISV_020014 [Vitis vinifera]
          Length = 342

 Score = 82.0 bits (201), Expect(2) = 2e-25
 Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
 Frame = -1

Query: 351 YLSKGARIILLKSTMVSIPIYFLSLFQIP--AANELERLMRNFLWGTSSDWRRYHLVSWD 178
           Y+SKG RI L+KST+ SIPIY LSLF++P   A  LE+L R+FLWG     R+ HL++W+
Sbjct: 49  YISKGGRITLIKSTLASIPIYQLSLFRMPKSVAKRLEKLQRDFLWGGGRMERKIHLINWE 108

Query: 177 KVCTPKEMGGPG 142
            VCT K  GG G
Sbjct: 109 VVCTQKVKGGLG 120



 Score = 58.5 bits (140), Expect(2) = 2e-25
 Identities = 24/50 (48%), Positives = 33/50 (66%)
 Frame = -2

Query: 164 QRKWGDLEIRRLVDMNEGMLTKWIWNFGIDDGRLWKKTIKAKYGSEGGSW 15
           Q+  G L IR++  +N+ +L+KWIW F  ++G LWKK I  KYG EG  W
Sbjct: 113 QKVKGGLGIRKIDLLNKALLSKWIWRFAFEEGTLWKKVIGVKYGQEGLGW 162


>emb|CAN77370.1| hypothetical protein VITISV_033119 [Vitis vinifera]
          Length = 1190

 Score = 82.0 bits (201), Expect(2) = 3e-25
 Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
 Frame = -1

Query: 351 YLSKGARIILLKSTMVSIPIYFLSLFQIPAA--NELERLMRNFLWGTSSDWRRYHLVSWD 178
           YLSKG RI L+KST+VSIPIY +S+F++P +    LE+L R+FLWG  +  R+ HLV+W 
Sbjct: 741 YLSKGGRITLIKSTLVSIPIYQMSIFRMPKSVVKRLEKLQRDFLWGXGNTARKIHLVNWK 800

Query: 177 KVCTPKEMGGPG 142
             CT K+ GG G
Sbjct: 801 VXCTQKDKGGLG 812



 Score = 58.2 bits (139), Expect(2) = 3e-25
 Identities = 24/50 (48%), Positives = 32/50 (64%)
 Frame = -2

Query: 164 QRKWGDLEIRRLVDMNEGMLTKWIWNFGIDDGRLWKKTIKAKYGSEGGSW 15
           Q+  G L IRR+  +N+ +L KWIW F ++   LWKK I  K+G EGG W
Sbjct: 805 QKDKGGLGIRRMGSLNKALLGKWIWRFAVEKDVLWKKVIGVKHGLEGGGW 854


>emb|CAN65634.1| hypothetical protein VITISV_007119 [Vitis vinifera]
          Length = 1703

 Score = 85.1 bits (209), Expect(2) = 5e-25
 Identities = 42/72 (58%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
 Frame = -1

Query: 351  YLSKGARIILLKSTMVSIPIYFLSLFQIP--AANELERLMRNFLWGTSSDWRRYHLVSWD 178
            YLSKG RI L+KST+VSIPIY LSLF++P      LE+L R+FLWG  S  R+ HL++W+
Sbjct: 920  YLSKGERITLIKSTLVSIPIYQLSLFKMPKLVVKRLEKLQRDFLWGGGSLERKIHLINWE 979

Query: 177  KVCTPKEMGGPG 142
             VCT K+ GG G
Sbjct: 980  VVCTQKKTGGLG 991



 Score = 54.3 bits (129), Expect(2) = 5e-25
 Identities = 23/50 (46%), Positives = 31/50 (62%)
 Frame = -2

Query: 164  QRKWGDLEIRRLVDMNEGMLTKWIWNFGIDDGRLWKKTIKAKYGSEGGSW 15
            Q+K G L IR++V +N+ +L K IW F  +    WKK I+ KYG EG  W
Sbjct: 984  QKKTGGLGIRKIVLLNKALLGKQIWRFAFEKDLFWKKVIRVKYGQEGCGW 1033


Top