BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038286
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   124   9e-27
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   117   2e-24
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   113   3e-23
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   111   8e-23
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  124 bits (312), Expect = 9e-27
 Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 8/201 (3%)
 Frame = -3

Query: 580  PGDEAWSSLDNTCSNFYQDAIFFNGQFYAVCNRGIVKVCEINTSHPKATPIATPP----- 416
            PG + W+ L++  S    D I+FNG F AV     V +C+I+ S  K    A  P     
Sbjct: 1094 PGHQTWTLLESE-SGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPALQDV 1152

Query: 415  DGIVKNKFYLVEISGDLHLVER-IFDYHDGPSRRDFYYI-TEAFEVHKFDFHTKKWSLLD 242
            D I     YLVE  G++++V R ++D     +RRD  Y+ T  F V K D   K+W  ++
Sbjct: 1153 DEIEYEAKYLVESGGEIYMVTRNLYD----TARRDIPYMRTWTFSVLKLDMCNKRWEEVE 1208

Query: 241  DLGDHALFLGNNTSFAVSTSDYPEFKRNCVYFTDDHSEVYS-NDFYDMGVYDMENDTVEP 65
            +L   + FLGNN SF+   SDYPEF++N +YFTDD+    +    +DMG+Y+ +N  +E 
Sbjct: 1209 NLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNIPRNFDMGIYNFQNTQIEH 1268

Query: 64   IYSGNDIISKFSRPIFIMPSY 2
               G+D +S FS P++I PS+
Sbjct: 1269 YPVGHDALSMFSAPLWIRPSF 1289


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  117 bits (292), Expect = 2e-24
 Identities = 66/195 (33%), Positives = 111/195 (56%), Gaps = 5/195 (2%)
 Frame = -3

Query: 574 DEAWSSLDNTCSNFYQDAIFFNGQFYAVCNRGIVKVCEINTSHPKATPIATPPDGIVKNK 395
           D++W+ L++  S + +D IF  G FYAV   G + VC+++ S P+ + I  P      + 
Sbjct: 196 DDSWTFLEDAQS-YAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQ-FGGDL 253

Query: 394 FYLVEISGDLHLVERIFD--YHDGPSRRDFYYITEAFEVHKFDFHTKKWSLLDDLGDHAL 221
            YLVE   +L LV R  D  Y   P +    Y T  F+V + D    +W ++  LGD AL
Sbjct: 254 QYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRAL 313

Query: 220 FLGNNTSFAVSTSDYPEFKRNCVYFTDDHSEVYSNDF---YDMGVYDMENDTVEPIYSGN 50
           FLG N S ++S+ D+P  K NC+Y+TDD+SE   +      D+G++++E+ ++EP+   +
Sbjct: 314 FLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSH 373

Query: 49  DIISKFSRPIFIMPS 5
             I ++  P+++ P+
Sbjct: 374 FRI-RWPPPLWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  113 bits (282), Expect = 3e-23
 Identities = 65/195 (33%), Positives = 110/195 (56%), Gaps = 5/195 (2%)
 Frame = -3

Query: 574 DEAWSSLDNTCSNFYQDAIFFNGQFYAVCNRGIVKVCEINTSHPKATPIATPPDGIVKNK 395
           D++W+ L++  S + +D IF  G FYAV   G + VC+++ S P+ + I  P      + 
Sbjct: 196 DDSWTFLEDAQS-YSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQ-FGGDL 253

Query: 394 FYLVEISGDLHLVERIFD--YHDGPSRRDFYYITEAFEVHKFDFHTKKWSLLDDLGDHAL 221
            YLVE   +L LV R  D  Y     +    Y T  F+V + D    +W ++  LGD AL
Sbjct: 254 QYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRAL 313

Query: 220 FLGNNTSFAVSTSDYPEFKRNCVYFTDDHSEVYSNDF---YDMGVYDMENDTVEPIYSGN 50
           FLG N S ++S+ D+P  K NC+Y+TDD+SE   +      D+G++++E+ ++EP+   +
Sbjct: 314 FLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSH 373

Query: 49  DIISKFSRPIFIMPS 5
             I ++  P+++ P+
Sbjct: 374 FRI-RWPPPLWVTPN 387


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score =  111 bits (278), Expect = 8e-23
 Identities = 68/201 (33%), Positives = 113/201 (56%), Gaps = 10/201 (4%)
 Frame = -3

Query: 577 GDEAWSSLDNTCSNFYQDAIFFNGQFYAVCNRGIVKVCEINTSHPKATPIATPPDGIVKN 398
           GD++WS ++N  S F +D IF NG FYAV   G + +C+I++  P+ + + TP      +
Sbjct: 198 GDKSWSLVENARS-FCEDVIFVNGMFYAVNKAGQIVICDISSDSPRVSFMETPRQA-GGD 255

Query: 397 KFYLVEISGDLHLVERIFDYH---DGPSRRD-FYYITEAFEVHKFDFHTKKWSLLDDLGD 230
             YLV    +L LV R  D     D P       Y T  FEV + D++  +W  +  LGD
Sbjct: 256 MQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGD 315

Query: 229 HALFLGNNTSFAVSTSDYPEFKRNCVYFTDDHSEV-YSNDF--YDMGVYDMENDTVEPI- 62
            ALF+G N+S ++S +D+     NC+Y+TDD+ +  Y   F  +D+G++ + ++T+EP+ 
Sbjct: 316 KALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEPLP 375

Query: 61  -YSGNDIIS-KFSRPIFIMPS 5
            Y  N     ++S P+++ P+
Sbjct: 376 CYPRNFTSPLQWSPPLWVSPN 396


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  109 bits (273), Expect = 3e-22
 Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 9/200 (4%)
 Frame = -3

Query: 577 GDEAWSSLDNTCSNFYQDAIFFNGQFYAVCNRGIVKVCEINTSHPKATPIATPPDGIVKN 398
           GDE W+ ++N+ S F +D I+FNG FYAV   G + VC++N + PK + I TP   I  +
Sbjct: 199 GDECWNIVENSRS-FSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIETPRQ-IGGD 256

Query: 397 KFYLVEISGDLHLVERIFDYHDGPSRRDFYYITEAFEVHKFDFHTKKWSLLDDLGDHALF 218
             YLV     L LV R  D         F Y T  FEV K D +  +W  +  LGD  LF
Sbjct: 257 MQYLVSSGDGLLLVTRYLDLD--VEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLF 314

Query: 217 LGNNTSFAVSTSDYPEFKRNCVYFTDDHSEVYSNDF------YDMGVYDMENDTVEPI-- 62
           +G N+S A+S S       +C+Y+TDD+S   +N++      +D+G++ + + ++EP+  
Sbjct: 315 IGENSSLALSASGLSGCMGDCIYYTDDYS---ANNYDGHIGEHDLGIFKLSDGSIEPLPC 371

Query: 61  YSGNDIIS-KFSRPIFIMPS 5
           Y  N     ++  P++I P+
Sbjct: 372 YPRNSYSRLQWPPPLWISPN 391