BLASTX nr result

ID: Cimicifuga21_contig00038253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038253
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273198.1| PREDICTED: high mobility group B protein 13-...    73   2e-11
emb|CAN70902.1| hypothetical protein VITISV_028213 [Vitis vinifera]    64   1e-08

>ref|XP_002273198.1| PREDICTED: high mobility group B protein 13-like [Vitis vinifera]
          Length = 505

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 44/80 (55%), Positives = 56/80 (70%), Gaps = 8/80 (10%)
 Frame = +2

Query: 2   TNEANILAGKIS----SPLPDLGDVAGKENQETLF--LSSKKNNKPASKTKNSKNP--FE 157
           TN+ANILAG+IS    +P+P   + AGKEN E+L   LS KK +K A K K SK    FE
Sbjct: 31  TNKANILAGQISESSPAPVPTPSEDAGKENHESLSQPLSGKKKSKGAQKGKKSKESQSFE 90

Query: 158 KELQELQGKFEQMRIEKEKT 217
           ++LQE+Q K EQ+R+EKEKT
Sbjct: 91  RDLQEMQEKLEQLRLEKEKT 110


>emb|CAN70902.1| hypothetical protein VITISV_028213 [Vitis vinifera]
          Length = 532

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)
 Frame = +2

Query: 2   TNEANILAGKIS----SPLPDLGDVAGKENQETLF--LSSKKNNKPASKTKNSKNP--FE 157
           TN+ANILAG+IS    +P+    + A KEN E+L   LS KK  K A K K SK    FE
Sbjct: 31  TNKANILAGQISESSPAPVXTPXEDAXKENHESLSQPLSGKKKXKGAQKGKKSKESQSFE 90

Query: 158 KELQELQGKFEQMRIEKEKT 217
           ++LQE+Q K  Q+R+EKEKT
Sbjct: 91  RDLQEMQEKLXQLRLEKEKT 110


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