BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038240
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]    65   4e-09
ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi...    65   6e-09
ref|XP_003625044.1| Pentatricopeptide repeat-containing protein ...    60   1e-07
ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
          Length = 483

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/78 (39%), Positives = 46/78 (58%)
 Frame = -2

Query: 301 FCKNEDYDGVVQVLNEMLERSMEPXXXXXXXXXXXXLRHKKFDMASKVCKDIERRHLLIK 122
           FCKNED+DG V+V+ EM ERS+ P                K ++A K+CK++E +HL+ +
Sbjct: 401 FCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMPE 460

Query: 121 GFEKLKFITVEGEVADRE 68
           GF+K K I    E  ++E
Sbjct: 461 GFDKXKTINXRAESEEKE 478


>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/78 (39%), Positives = 46/78 (58%)
 Frame = -2

Query: 301 FCKNEDYDGVVQVLNEMLERSMEPXXXXXXXXXXXXLRHKKFDMASKVCKDIERRHLLIK 122
           FCKNED+DG V+V+ EM ERS+ P                K ++A K+CK++E +HL+ +
Sbjct: 534 FCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMPE 593

Query: 121 GFEKLKFITVEGEVADRE 68
           GF+K K I    E  ++E
Sbjct: 594 GFDKSKTINFRAESEEKE 611


>ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500059|gb|AES81262.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 521

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
 Frame = -2

Query: 346 M*RSKIEKSENS----THAFCKNEDYDGVVQVLNEMLERSMEPXXXXXXXXXXXXLRHKK 179
           M RS    +EN+      AFCKNED+DG VQVL +MLER M P             R  +
Sbjct: 422 MVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSGLCRCGR 481

Query: 178 FDMASKVCKDIERRHLLIKGFEKLKFITVEGE 83
              A  +C +IE + LL +GF++ K +    E
Sbjct: 482 KQFALMLCSEIEAKRLLPQGFDREKIVITGSE 513


>ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 1 [Glycine max]
           gi|356526065|ref|XP_003531640.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 522

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/74 (41%), Positives = 38/74 (51%)
 Frame = -2

Query: 304 AFCKNEDYDGVVQVLNEMLERSMEPXXXXXXXXXXXXLRHKKFDMASKVCKDIERRHLLI 125
           AFCKNED+DG VQVL +ML R M P             R  K  +A  +C ++E R LL 
Sbjct: 444 AFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLP 503

Query: 124 KGFEKLKFITVEGE 83
            GF+K K      E
Sbjct: 504 DGFDKEKIAITHPE 517