BLASTX nr result

ID: Cimicifuga21_contig00038139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038139
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303439.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002326547.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_004165873.1| PREDICTED: inactive poly [ADP-ribose] polyme...    60   2e-07
ref|XP_004150664.1| PREDICTED: inactive poly [ADP-ribose] polyme...    60   2e-07
ref|XP_002277020.2| PREDICTED: inactive poly [ADP-ribose] polyme...    59   3e-07

>ref|XP_002303439.1| predicted protein [Populus trichocarpa] gi|222840871|gb|EEE78418.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 22/117 (18%)
 Frame = +1

Query: 1   IHVVEKGFAETKKLLFEMEVRGSPCVADFLHMALFDLNSGSQQPIGWMNKAGKCFFPVNF 180
           + ++ K F + KK   E+E+ G   V DFLHM   D+ +G QQPI W+++AG CFFP ++
Sbjct: 97  VALIRKDF-QGKKAFVEVELEGRCYVIDFLHMLRLDMKTGIQQPIAWIDEAGSCFFPESY 155

Query: 181 ----EPHDCSQR--------------GDEEIEVEIEAPVS----KRLKCDEGEAKVI 285
               EP+ C Q               G  EI++++E  ++     +LK   GE+  +
Sbjct: 156 ADEDEPYLCCQHDCVKDQGPIFREPLGPHEIKLQLEIDINGGNQSKLKEYSGESNAL 212


>ref|XP_002326547.1| predicted protein [Populus trichocarpa] gi|222833869|gb|EEE72346.1|
           predicted protein [Populus trichocarpa]
          Length = 623

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 22/98 (22%)
 Frame = +1

Query: 34  KKLLFEMEVRGSPCVADFLHMALFDLNSGSQQPIGWMNKAGKCFFPVNF----EPHDCSQ 201
           KK + E+E+ G   V DFLHM   D+ +G QQPI W+++AG CFFP  +    EPH C Q
Sbjct: 117 KKAVVEVELEGRRYVIDFLHMLRMDMKTGIQQPIAWIDEAGGCFFPEIYADEDEPHLCCQ 176

Query: 202 R--------------GDEEIEVEIEAPVS----KRLKC 261
                          G  EI++++E  ++     +L+C
Sbjct: 177 HDCAKDQGSIFREPPGSHEIKLQLEIDINGGDQSKLEC 214


>ref|XP_004165873.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Cucumis
           sativus]
          Length = 601

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 20/103 (19%)
 Frame = +1

Query: 28  ETKKLLFEMEVRGSPCVADFLHMALFDLNSGSQQPIGWMNKAGKCFFPV----------- 174
           + KK   E++     CV DFLHM   DLN+G QQP+ W++ AG+CFFP            
Sbjct: 111 QAKKASLEIKFNEQHCVLDFLHMFFLDLNTGLQQPLAWIDAAGRCFFPEIYGADTSECCH 170

Query: 175 --NFEPHDCSQRGDEE-------IEVEIEAPVSKRLKCDEGEA 276
             NFE  +       E       +E+EI       LK   GE+
Sbjct: 171 SNNFENEEPQVEEAHESDIIKLQLEIEISGIAQSSLKVCSGES 213


>ref|XP_004150664.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Cucumis
           sativus]
          Length = 601

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 20/103 (19%)
 Frame = +1

Query: 28  ETKKLLFEMEVRGSPCVADFLHMALFDLNSGSQQPIGWMNKAGKCFFPV----------- 174
           + KK   E++     CV DFLHM   DLN+G QQP+ W++ AG+CFFP            
Sbjct: 111 QAKKASLEIKFNEQHCVLDFLHMFFLDLNTGLQQPLAWIDAAGRCFFPEISGADTSECCH 170

Query: 175 --NFEPHDCSQRGDEE-------IEVEIEAPVSKRLKCDEGEA 276
             NFE  +       E       +E+EI       LK   GE+
Sbjct: 171 SNNFENEEPQVEEAHESDIIKLQLEIEISGIAQSSLKVCSGES 213


>ref|XP_002277020.2| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Vitis
           vinifera]
          Length = 598

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 16/98 (16%)
 Frame = +1

Query: 1   IHVVEKGFAETKKLLFEMEVRGSPCVADFLHMALFDLNSGSQQPIGWMNKAGKCFFPVNF 180
           + +V+K F + KK   E+E+  +  + DFLHM   DL +G ++PI W+++AG CFFP  F
Sbjct: 92  VGLVKKDF-QVKKSYIEVELNNNHFMIDFLHMKRVDLKTGMEKPIAWIDEAGNCFFPEIF 150

Query: 181 E---------PHDCSQR-------GDEEIEVEIEAPVS 246
                      H+C Q+       G  +I++++E  V+
Sbjct: 151 SGDAESHNCCGHECGQQLLFREPYGSHDIKLQLEIDVN 188


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