BLASTX nr result
ID: Cimicifuga21_contig00038136
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00038136 (343 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI34215.3| unnamed protein product [Vitis vinifera] 60 3e-08 ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit... 60 3e-08 emb|CAN69284.1| hypothetical protein VITISV_028679 [Vitis vinifera] 60 3e-08 ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersic... 55 1e-06 ref|XP_002319052.1| predicted protein [Populus trichocarpa] gi|2... 55 1e-06 >emb|CBI34215.3| unnamed protein product [Vitis vinifera] Length = 1083 Score = 60.1 bits (144), Expect(2) = 3e-08 Identities = 27/39 (69%), Positives = 31/39 (79%) Frame = -3 Query: 341 EYVQYDLEILNSTIEINFERLVDNFVFLSFFIGKDSSTH 225 EY+QYDLEILN EINFERL+D+FVFL FF+G D H Sbjct: 300 EYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPH 338 Score = 22.3 bits (46), Expect(2) = 3e-08 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -1 Query: 235 LPHMPA*EIRE 203 LPHMP EIRE Sbjct: 336 LPHMPTLEIRE 346 >ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera] Length = 950 Score = 60.1 bits (144), Expect(2) = 3e-08 Identities = 27/39 (69%), Positives = 31/39 (79%) Frame = -3 Query: 341 EYVQYDLEILNSTIEINFERLVDNFVFLSFFIGKDSSTH 225 EY+QYDLEILN EINFERL+D+FVFL FF+G D H Sbjct: 300 EYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPH 338 Score = 22.3 bits (46), Expect(2) = 3e-08 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -1 Query: 235 LPHMPA*EIRE 203 LPHMP EIRE Sbjct: 336 LPHMPTLEIRE 346 >emb|CAN69284.1| hypothetical protein VITISV_028679 [Vitis vinifera] Length = 321 Score = 60.1 bits (144), Expect(2) = 3e-08 Identities = 27/39 (69%), Positives = 31/39 (79%) Frame = -3 Query: 341 EYVQYDLEILNSTIEINFERLVDNFVFLSFFIGKDSSTH 225 EY+QYDLEILN EINFERL+D+FVFL FF+G D H Sbjct: 237 EYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPH 275 Score = 22.3 bits (46), Expect(2) = 3e-08 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -1 Query: 235 LPHMPA*EIRE 203 LPHMP EIRE Sbjct: 273 LPHMPTLEIRE 283 >ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum] gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4 [Solanum lycopersicum] Length = 978 Score = 55.1 bits (131), Expect(2) = 1e-06 Identities = 24/39 (61%), Positives = 30/39 (76%) Frame = -3 Query: 341 EYVQYDLEILNSTIEINFERLVDNFVFLSFFIGKDSSTH 225 EY+QYDLEI N +I+FER+VD+FVFL FF+G D H Sbjct: 307 EYLQYDLEIYNPPFQIDFERVVDDFVFLCFFVGNDFLPH 345 Score = 22.3 bits (46), Expect(2) = 1e-06 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -1 Query: 235 LPHMPA*EIRE 203 LPHMP EIRE Sbjct: 343 LPHMPTLEIRE 353 >ref|XP_002319052.1| predicted protein [Populus trichocarpa] gi|222857428|gb|EEE94975.1| predicted protein [Populus trichocarpa] Length = 965 Score = 55.1 bits (131), Expect(2) = 1e-06 Identities = 24/39 (61%), Positives = 30/39 (76%) Frame = -3 Query: 341 EYVQYDLEILNSTIEINFERLVDNFVFLSFFIGKDSSTH 225 EY+QYDL+ILN I+FER+VD+FVFL FF+G D H Sbjct: 312 EYLQYDLDILNPPFAIDFERIVDDFVFLCFFVGNDFLPH 350 Score = 22.3 bits (46), Expect(2) = 1e-06 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -1 Query: 235 LPHMPA*EIRE 203 LPHMP EIRE Sbjct: 348 LPHMPTLEIRE 358