BLASTX nr result

ID: Cimicifuga21_contig00038136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038136
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34215.3| unnamed protein product [Vitis vinifera]               60   3e-08
ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...    60   3e-08
emb|CAN69284.1| hypothetical protein VITISV_028679 [Vitis vinifera]    60   3e-08
ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersic...    55   1e-06
ref|XP_002319052.1| predicted protein [Populus trichocarpa] gi|2...    55   1e-06

>emb|CBI34215.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score = 60.1 bits (144), Expect(2) = 3e-08
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -3

Query: 341 EYVQYDLEILNSTIEINFERLVDNFVFLSFFIGKDSSTH 225
           EY+QYDLEILN   EINFERL+D+FVFL FF+G D   H
Sbjct: 300 EYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPH 338



 Score = 22.3 bits (46), Expect(2) = 3e-08
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 235 LPHMPA*EIRE 203
           LPHMP  EIRE
Sbjct: 336 LPHMPTLEIRE 346


>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 950

 Score = 60.1 bits (144), Expect(2) = 3e-08
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -3

Query: 341 EYVQYDLEILNSTIEINFERLVDNFVFLSFFIGKDSSTH 225
           EY+QYDLEILN   EINFERL+D+FVFL FF+G D   H
Sbjct: 300 EYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPH 338



 Score = 22.3 bits (46), Expect(2) = 3e-08
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 235 LPHMPA*EIRE 203
           LPHMP  EIRE
Sbjct: 336 LPHMPTLEIRE 346


>emb|CAN69284.1| hypothetical protein VITISV_028679 [Vitis vinifera]
          Length = 321

 Score = 60.1 bits (144), Expect(2) = 3e-08
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -3

Query: 341 EYVQYDLEILNSTIEINFERLVDNFVFLSFFIGKDSSTH 225
           EY+QYDLEILN   EINFERL+D+FVFL FF+G D   H
Sbjct: 237 EYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPH 275



 Score = 22.3 bits (46), Expect(2) = 3e-08
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 235 LPHMPA*EIRE 203
           LPHMP  EIRE
Sbjct: 273 LPHMPTLEIRE 283


>ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum]
           gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4
           [Solanum lycopersicum]
          Length = 978

 Score = 55.1 bits (131), Expect(2) = 1e-06
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = -3

Query: 341 EYVQYDLEILNSTIEINFERLVDNFVFLSFFIGKDSSTH 225
           EY+QYDLEI N   +I+FER+VD+FVFL FF+G D   H
Sbjct: 307 EYLQYDLEIYNPPFQIDFERVVDDFVFLCFFVGNDFLPH 345



 Score = 22.3 bits (46), Expect(2) = 1e-06
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 235 LPHMPA*EIRE 203
           LPHMP  EIRE
Sbjct: 343 LPHMPTLEIRE 353


>ref|XP_002319052.1| predicted protein [Populus trichocarpa] gi|222857428|gb|EEE94975.1|
           predicted protein [Populus trichocarpa]
          Length = 965

 Score = 55.1 bits (131), Expect(2) = 1e-06
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = -3

Query: 341 EYVQYDLEILNSTIEINFERLVDNFVFLSFFIGKDSSTH 225
           EY+QYDL+ILN    I+FER+VD+FVFL FF+G D   H
Sbjct: 312 EYLQYDLDILNPPFAIDFERIVDDFVFLCFFVGNDFLPH 350



 Score = 22.3 bits (46), Expect(2) = 1e-06
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 235 LPHMPA*EIRE 203
           LPHMP  EIRE
Sbjct: 348 LPHMPTLEIRE 358


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