BLASTX nr result

ID: Cimicifuga21_contig00038096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038096
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77370.1| unknown [Picea sitchensis]                             181   7e-44
ref|XP_003625401.1| Pleiotropic drug resistance protein [Medicag...   169   3e-40
ref|XP_002527329.1| ATP-binding cassette transporter, putative [...   168   4e-40
ref|XP_002512728.1| ATP-binding cassette transporter, putative [...   167   6e-40
ref|XP_002991414.1| ATP-binding cassette transporter [Selaginell...   167   1e-39

>gb|ADE77370.1| unknown [Picea sitchensis]
          Length = 412

 Score =  181 bits (458), Expect = 7e-44
 Identities = 85/124 (68%), Positives = 100/124 (80%)
 Frame = -3

Query: 372 NSQELINYFKTIEGIPKITPDYNPATWMLEASSAASENKLGVDFAEVYRESPLYQRNKAL 193
           +S +LI YF+ I G+PKI   YNPATWMLE SS A+E  LGVDFAEVY  SPL+QRN+AL
Sbjct: 50  HSYKLIEYFEAIPGVPKIRDGYNPATWMLEISSPAAETHLGVDFAEVYSNSPLFQRNQAL 109

Query: 192 IEQLNKPVSGSEDLYFKSKFSQSFWVQVKACLWKQNWSYWRNP*YNAVRFFFTSICALLF 13
           I++L+ PV GS DLYF +K+SQSF VQ  ACLWKQ+WSYWRNP YN VRFFFT++ ALLF
Sbjct: 110 IKELSTPVPGSRDLYFPTKYSQSFRVQCIACLWKQHWSYWRNPTYNVVRFFFTTVTALLF 169

Query: 12  ASIF 1
            SIF
Sbjct: 170 GSIF 173


>ref|XP_003625401.1| Pleiotropic drug resistance protein [Medicago truncatula]
            gi|355500416|gb|AES81619.1| Pleiotropic drug resistance
            protein [Medicago truncatula]
          Length = 1483

 Score =  169 bits (427), Expect = 3e-40
 Identities = 74/124 (59%), Positives = 98/124 (79%)
 Frame = -3

Query: 372  NSQELINYFKTIEGIPKITPDYNPATWMLEASSAASENKLGVDFAEVYRESPLYQRNKAL 193
            NS  LINYF+ I G+ KI   YNPATWMLE ++++ E +LG+DFAEVY+ S LY+RNKAL
Sbjct: 1123 NSSNLINYFEGIHGVSKIKDGYNPATWMLEVTTSSKERELGIDFAEVYQNSELYRRNKAL 1182

Query: 192  IEQLNKPVSGSEDLYFKSKFSQSFWVQVKACLWKQNWSYWRNP*YNAVRFFFTSICALLF 13
            I++L+ P   S+DLYF S++S+SFW Q  ACLWKQ+WSYWRNP YNA+RF +++  A+LF
Sbjct: 1183 IKELSTPAPCSKDLYFASQYSRSFWTQCMACLWKQHWSYWRNPEYNAIRFLYSTAVAVLF 1242

Query: 12   ASIF 1
             S+F
Sbjct: 1243 GSMF 1246


>ref|XP_002527329.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223533329|gb|EEF35081.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1434

 Score =  168 bits (426), Expect = 4e-40
 Identities = 76/124 (61%), Positives = 98/124 (79%)
 Frame = -3

Query: 372  NSQELINYFKTIEGIPKITPDYNPATWMLEASSAASENKLGVDFAEVYRESPLYQRNKAL 193
            +S  LINYF+ +EG+ K+T  YNPATWMLE +S+A E  LGVDFA +YR S LY+RNKA+
Sbjct: 1076 HSCHLINYFEGLEGVSKVTDGYNPATWMLEVTSSAQELTLGVDFANLYRNSDLYRRNKAM 1135

Query: 192  IEQLNKPVSGSEDLYFKSKFSQSFWVQVKACLWKQNWSYWRNP*YNAVRFFFTSICALLF 13
            I++L+KP  G++DLYF +++SQSF  Q  ACLWKQ WSYWRNP Y AVRF+FT+  AL+F
Sbjct: 1136 IQELSKPAPGTKDLYFPTQYSQSFLTQCMACLWKQYWSYWRNPPYTAVRFWFTTFIALMF 1195

Query: 12   ASIF 1
             +IF
Sbjct: 1196 GTIF 1199


>ref|XP_002512728.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223547739|gb|EEF49231.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1429

 Score =  167 bits (424), Expect = 6e-40
 Identities = 76/124 (61%), Positives = 97/124 (78%)
 Frame = -3

Query: 372  NSQELINYFKTIEGIPKITPDYNPATWMLEASSAASENKLGVDFAEVYRESPLYQRNKAL 193
            +S +LI YF+ IEG+P I   YNPATWMLE SS+A E  LG+DFA +Y+ S LY+RNKAL
Sbjct: 1072 HSCQLIKYFEAIEGVPDIKDGYNPATWMLEVSSSAQEMVLGLDFAAIYKNSELYRRNKAL 1131

Query: 192  IEQLNKPVSGSEDLYFKSKFSQSFWVQVKACLWKQNWSYWRNP*YNAVRFFFTSICALLF 13
            IE+L+ P  GS DLYF +++SQSF+ Q  ACLWKQ+WSYWRNP Y AVRF FT++ AL+F
Sbjct: 1132 IEELSTPPLGSNDLYFPTQYSQSFFTQCMACLWKQHWSYWRNPPYTAVRFLFTTVIALMF 1191

Query: 12   ASIF 1
             ++F
Sbjct: 1192 GTMF 1195


>ref|XP_002991414.1| ATP-binding cassette transporter [Selaginella moellendorffii]
            gi|300140807|gb|EFJ07526.1| ATP-binding cassette
            transporter [Selaginella moellendorffii]
          Length = 1474

 Score =  167 bits (422), Expect = 1e-39
 Identities = 75/124 (60%), Positives = 96/124 (77%)
 Frame = -3

Query: 372  NSQELINYFKTIEGIPKITPDYNPATWMLEASSAASENKLGVDFAEVYRESPLYQRNKAL 193
            NSQ+LI+YF+ I G+PKI   YNPATWMLE SS + E K+ VDFA +Y  S LYQRNKAL
Sbjct: 1113 NSQKLIDYFQAIPGVPKIKDGYNPATWMLEVSSTSVEQKMNVDFANIYLNSSLYQRNKAL 1172

Query: 192  IEQLNKPVSGSEDLYFKSKFSQSFWVQVKACLWKQNWSYWRNP*YNAVRFFFTSICALLF 13
            +++L+ P     DL+F +++SQSF+ Q+K+CLWKQNW+YWR+P YN VRF FT + ALLF
Sbjct: 1173 VKELSVPAPDRRDLHFSTQYSQSFYGQLKSCLWKQNWTYWRSPDYNCVRFLFTIMSALLF 1232

Query: 12   ASIF 1
             SIF
Sbjct: 1233 GSIF 1236


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