BLASTX nr result

ID: Cimicifuga21_contig00038070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038070
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264568.1| PREDICTED: uncharacterized protein LOC100241...   115   3e-24
gb|ADN87331.1| zinc finger protein-like protein [Vitis vinifera]      113   2e-23
gb|ADL36668.1| COL domain class transcription factor [Malus x do...   102   3e-20
ref|XP_002316440.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|XP_003530172.1| PREDICTED: uncharacterized protein LOC100781...    81   1e-13

>ref|XP_002264568.1| PREDICTED: uncharacterized protein LOC100241102 [Vitis vinifera]
          Length = 260

 Score =  115 bits (289), Expect = 3e-24
 Identities = 65/123 (52%), Positives = 80/123 (65%), Gaps = 3/123 (2%)
 Frame = +1

Query: 70  KVLKSKNVDVKAEAILVNWSRKLGLKSNNPCISLALHAFSICLSKFTTLPFRVSLASSLW 249
           K+    +VD KAE ILVNW RKLGL  N  C S+A HA  +CL K T LP RVSL +++ 
Sbjct: 135 KLRARSSVDAKAEDILVNWCRKLGL--NGSCTSVASHALGVCLVKLTVLPLRVSLVAAIS 192

Query: 250 LTLKLNKEILRSTCHNIKKLEEISGVPAKQMLLAEKKISRVLKINR---NSVVDLEEGWA 420
              KL+ +    T  N+K+L EISGVPAK +L AE K++RVLK+ R     V D EEGWA
Sbjct: 193 CAAKLSGDRSAYTPQNLKRLVEISGVPAKLILAAESKLARVLKMERRRPRHVRDREEGWA 252

Query: 421 ECS 429
           ECS
Sbjct: 253 ECS 255


>gb|ADN87331.1| zinc finger protein-like protein [Vitis vinifera]
          Length = 260

 Score =  113 bits (282), Expect = 2e-23
 Identities = 64/123 (52%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
 Frame = +1

Query: 70  KVLKSKNVDVKAEAILVNWSRKLGLKSNNPCISLALHAFSICLSKFTTLPFRVSLASSLW 249
           K+    +VD KAE ILVNW RKLGL  N  C S+A HA  +CL K T LP RVSL +++ 
Sbjct: 135 KLRARSSVDAKAEDILVNWCRKLGL--NGSCTSVASHALGVCLVKLTVLPLRVSLVAAIS 192

Query: 250 LTLKLNKEILRSTCHNIKKLEEISGVPAKQMLLAEKKISRVLKINR---NSVVDLEEGWA 420
              KL+ +    T  N+K+L EISGVPAK +L AE K++RVLK+ R     V D  EGWA
Sbjct: 193 CAAKLSGDRSAYTPQNLKRLVEISGVPAKLILAAESKLARVLKMERRRPRHVRDRVEGWA 252

Query: 421 ECS 429
           ECS
Sbjct: 253 ECS 255


>gb|ADL36668.1| COL domain class transcription factor [Malus x domestica]
          Length = 271

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 2/129 (1%)
 Frame = +1

Query: 46  NSERRRNRKVLKSKNVDVKAEAILVNWSRKLGLKSN--NPCISLALHAFSICLSKFTTLP 219
           NS RR   +   S++VD +AE   VNW ++LG+  N     +S A +AF  CL +  ++P
Sbjct: 145 NSVRRARART--SRSVDARAEGSFVNWCKRLGVNGNLAESVVSTASNAFGFCLERLASVP 202

Query: 220 FRVSLASSLWLTLKLNKEILRSTCHNIKKLEEISGVPAKQMLLAEKKISRVLKINRNSVV 399
            RV LA+S W  L+   +    TC N++++EE+SGVP K +L  E K+   L++ R    
Sbjct: 203 PRVCLAASFWFGLRFCGDRSVFTCQNLRRVEELSGVPVKLILAVEAKLGSELRVRRARRD 262

Query: 400 DLEEGWAEC 426
           DLEEGWAEC
Sbjct: 263 DLEEGWAEC 271


>ref|XP_002316440.1| predicted protein [Populus trichocarpa] gi|222865480|gb|EEF02611.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 52/132 (39%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
 Frame = +1

Query: 37  KNLNSERRRNRKVLKSKNVDVKAEAILVNWSRKLGLKSNNPCISLALHAFSICLSKFTTL 216
           KN+     R+R + +S+N+  ++E + VNW ++LGL + N  +  A  A ++C  +   L
Sbjct: 122 KNIPGRSLRDR-LKRSRNL--RSEGVFVNWCKRLGL-NGNLVVQRATRAMALCFGRLA-L 176

Query: 217 PFRVSLASSLWLTLKLNKEILRSTCHNIKKLEEISGVPAKQMLLAEKKISRVLKINRNSV 396
           PFRVSLA+S W  L+L  +   +T  N+++LEE+SGVP K ++  E KI + L+  R  +
Sbjct: 177 PFRVSLAASFWFGLRLCGDKSVTTWENLRRLEEVSGVPNKLIVTVEMKIEQALRSKRLQL 236

Query: 397 -VDLEEGWAECS 429
             ++EEGWAECS
Sbjct: 237 QKEMEEGWAECS 248


>ref|XP_003530172.1| PREDICTED: uncharacterized protein LOC100781783 [Glycine max]
           gi|347666428|gb|AEP17825.1| B-box 53 protein [Expression
           vector pMON98939]
          Length = 243

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 14/138 (10%)
 Frame = +1

Query: 52  ERRRNRKVLKSKNVDVKAEA--------------ILVNWSRKLGLKSNNPCISLALHAFS 189
           +RRR R+   S +V   A                +   WSR++GL        +A +A S
Sbjct: 109 KRRRRRRSFSSSSVTDDASPAAKKRRRNGGSVAEVFEKWSREIGLGLGVNGNRVASNALS 168

Query: 190 ICLSKFTTLPFRVSLASSLWLTLKLNKEILRSTCHNIKKLEEISGVPAKQMLLAEKKISR 369
           +CL K+ +LPFRV+ A+S WL L+   +   +TC N+ +LE ISGVPAK +L A   ++R
Sbjct: 169 VCLGKWRSLPFRVAAATSFWLGLRFCGDRGLATCQNLARLEAISGVPAKLILGAHANLAR 228

Query: 370 VLKINRNSVVDLEEGWAE 423
           V    R    +L+EGW E
Sbjct: 229 VFTHRR----ELQEGWGE 242


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