BLASTX nr result

ID: Cimicifuga21_contig00037454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037454
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15206.3| unnamed protein product [Vitis vinifera]              160   1e-37
emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]   159   2e-37
ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group] g...   147   9e-34
ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containi...   147   9e-34

>emb|CBI15206.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  160 bits (404), Expect = 1e-37
 Identities = 73/125 (58%), Positives = 98/125 (78%)
 Frame = +3

Query: 3   LSVHGRGEEALSLFSEMEMDGGVRPNEVTFVGVLCGCSHSGLVEEGRFYFDLMQRKYGIE 182
           L++HG G+EAL LFS+M  +    PNEVTF+GVLC CSH G+VEEGR YFD+M+R Y I+
Sbjct: 228 LAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQ 287

Query: 183 PTIKHYGCMVDLLGRAGLVDEAFEMITKMRIPPNTVVWGSLLSACRAQNDLNMAESVCQR 362
           PTIKHYG MVD+LGRAGLV+EA+ +I  M I  N++VW +LL+ACR   +L +AE V Q+
Sbjct: 288 PTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVHGNLELAEQVRQQ 347

Query: 363 IIEIK 377
           ++E++
Sbjct: 348 LLELE 352


>emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
          Length = 516

 Score =  159 bits (402), Expect = 2e-37
 Identities = 73/125 (58%), Positives = 97/125 (77%)
 Frame = +3

Query: 3   LSVHGRGEEALSLFSEMEMDGGVRPNEVTFVGVLCGCSHSGLVEEGRFYFDLMQRKYGIE 182
           L++HG G+EAL LFS+M  +    PNEVTF+GVLC CSH G+VEEGR YFD+M+R Y I+
Sbjct: 328 LAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQ 387

Query: 183 PTIKHYGCMVDLLGRAGLVDEAFEMITKMRIPPNTVVWGSLLSACRAQNDLNMAESVCQR 362
           PTIKHYG MVD+LGRAGLV+EA+ +I  M I  N++VW +LL+ACR   +L +AE V Q 
Sbjct: 388 PTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVHGNLELAEQVRQX 447

Query: 363 IIEIK 377
           ++E++
Sbjct: 448 LLELE 452


>ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|222867072|gb|EEF04203.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  148 bits (373), Expect = 5e-34
 Identities = 64/125 (51%), Positives = 92/125 (73%)
 Frame = +3

Query: 3   LSVHGRGEEALSLFSEMEMDGGVRPNEVTFVGVLCGCSHSGLVEEGRFYFDLMQRKYGIE 182
           L+ HG  EE++ LF+EM+    ++PNE+TFVGV+  CSH+G VEEGR YF LM+ +Y IE
Sbjct: 353 LAFHGHAEESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIE 412

Query: 183 PTIKHYGCMVDLLGRAGLVDEAFEMITKMRIPPNTVVWGSLLSACRAQNDLNMAESVCQR 362
           P + H+GCMVDLLGRAGL+ EAFE+I KM I PN ++W +LL ACR   ++ +     +R
Sbjct: 413 PNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANER 472

Query: 363 IIEIK 377
           +++++
Sbjct: 473 LLKLR 477


>ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
           gi|34394298|dbj|BAC84780.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza
           sativa Japonica Group]
          Length = 673

 Score =  147 bits (371), Expect = 9e-34
 Identities = 61/122 (50%), Positives = 97/122 (79%)
 Frame = +3

Query: 9   VHGRGEEALSLFSEMEMDGGVRPNEVTFVGVLCGCSHSGLVEEGRFYFDLMQRKYGIEPT 188
           +HGRG+EAL +F+EM+  G +RPN +TF+ VL  CSH+GL++EGR++++ M++++GIE  
Sbjct: 379 MHGRGQEALEIFTEMKRSG-LRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAG 437

Query: 189 IKHYGCMVDLLGRAGLVDEAFEMITKMRIPPNTVVWGSLLSACRAQNDLNMAESVCQRII 368
           ++HYGCMVDLLGRAG +DEA+ +I +M++ P+  +WG+LLSACR   ++ +AE   +R+ 
Sbjct: 438 VEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLF 497

Query: 369 EI 374
           E+
Sbjct: 498 EL 499


>ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 500

 Score =  147 bits (371), Expect = 9e-34
 Identities = 64/123 (52%), Positives = 93/123 (75%)
 Frame = +3

Query: 3   LSVHGRGEEALSLFSEMEMDGGVRPNEVTFVGVLCGCSHSGLVEEGRFYFDLMQRKYGIE 182
           L++HG GE+ +  F +M +D GV+PN VTFV +L GCSHSGLV EG +YFD M+  +G+E
Sbjct: 297 LAMHGLGEQLIEAFEKM-VDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVE 355

Query: 183 PTIKHYGCMVDLLGRAGLVDEAFEMITKMRIPPNTVVWGSLLSACRAQNDLNMAESVCQR 362
           PT++H+GC+VDLLGRAGL+D+A ++I++M   PN  +WGSLL+ACR   ++ + E   Q 
Sbjct: 356 PTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEIGELAAQW 415

Query: 363 IIE 371
           +I+
Sbjct: 416 LIK 418


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