BLASTX nr result

ID: Cimicifuga21_contig00037440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037440
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    60   2e-07
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    59   5e-07
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              57   1e-06
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              57   1e-06
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    57   1e-06

>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/96 (33%), Positives = 48/96 (50%)
 Frame = -3

Query: 379 DMVPQIRHPGVLTLTNISWIPPDLGWRKLNTDGSVLVNXXXXXXGVLRNQVGTFMFGYTQ 200
           + +  I +P   ++    W  P+ GW KLNTDGS+  N       +LR+  G  +  +  
Sbjct: 290 NQIASILNPVSRSIRWCEWTKPEFGWTKLNTDGSIHSNTVSFGG-LLRDYRGEPICAFVS 348

Query: 199 PLFHSDVLLAEYWAVWLGMQVLFNLGMHKIIIEMDS 92
                DV LAE WA+W G+ +   LG+  I +E DS
Sbjct: 349 KAPQGDVFLAELWAIWRGLVLSLGLGIKAIWVESDS 384


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
 Frame = -3

Query: 496  VTLFAMGL*HIWIARNQNRFSSRVAHPAKTTFMSWELYWDMVPQIRH------PGVLTLT 335
            VT F     HIW +RN+  F   V HP    F    +  D    IR        G  +  
Sbjct: 1138 VTKFTTAFWHIWCSRNKTVFECAVNHPK---FTYNRVVADFFTNIRAFQVNNTQGNGSKV 1194

Query: 334  NISWIPPDLGWRKLNTDGSVLVNXXXXXXG-VLRNQVGTFMFGYTQPLFHSDVLLAEYWA 158
             + W PP  G+ KLNTDG+   +      G V R+ VG +  G+ + +       AE  A
Sbjct: 1195 VLRWKPPHQGFLKLNTDGAWKADWENAGIGGVFRDAVGNWELGFAKRVDAGSPEAAELMA 1254

Query: 157  VWLGMQVLFNLGMHKIIIEMDSKILWRILA 68
            +  G+QV ++   HK+ +E D+K + ++LA
Sbjct: 1255 IREGLQVAWDCNYHKLEVECDAKGVVQLLA 1284


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 4/147 (2%)
 Frame = -3

Query: 490  LFAMGL*HIWIARNQNRFSSRVAHPAKTTFMSW-ELYWDMVPQIRHPGVLTL--TNISWI 320
            +F   L ++W ARN+  F + +  P+     S+ E         +  G+ T   T + W 
Sbjct: 1674 IFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTGLQTAFQTWVVWS 1733

Query: 319  PPDLGWRKLNTDGSVLVNXXXXXXG-VLRNQVGTFMFGYTQPLFHSDVLLAEYWAVWLGM 143
            PP  G+ KLN+DG+   +      G +LRN+ G ++ GYT  +  ++  LAE W +  G+
Sbjct: 1734 PPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGL 1793

Query: 142  QVLFNLGMHKIIIEMDSKILWRILADD 62
             +  N G  K+I E DS+ + ++L  D
Sbjct: 1794 LLAKNRGFTKLIAETDSEAVVQVLRKD 1820


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 4/147 (2%)
 Frame = -3

Query: 490  LFAMGL*HIWIARNQNRFSSRVAHPAKTTFMSW-ELYWDMVPQIRHPGVLTL--TNISWI 320
            +F   L ++W ARN+  F + +  P+     S+ E         +  G+ T   T + W 
Sbjct: 1142 IFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTGLQTAFQTWVVWS 1201

Query: 319  PPDLGWRKLNTDGSVLVNXXXXXXG-VLRNQVGTFMFGYTQPLFHSDVLLAEYWAVWLGM 143
            PP  G+ KLN+DG+   +      G +LRN+ G ++ GYT  +  ++  LAE W +  G+
Sbjct: 1202 PPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGL 1261

Query: 142  QVLFNLGMHKIIIEMDSKILWRILADD 62
             +  N G  K+I E DS+ + ++L  D
Sbjct: 1262 LLAKNRGFTKLIAETDSEAVVQVLRKD 1288


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/79 (36%), Positives = 41/79 (51%)
 Frame = -3

Query: 328 SWIPPDLGWRKLNTDGSVLVNXXXXXXGVLRNQVGTFMFGYTQPLFHSDVLLAEYWAVWL 149
           SW  P+ GW KLNTDGS+         G+ R+  G  +  Y      +D+ L E WA+W 
Sbjct: 267 SWEKPEFGWTKLNTDGSI-DRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWR 325

Query: 148 GMQVLFNLGMHKIIIEMDS 92
           G+ +   LG+  I +E DS
Sbjct: 326 GLVLASGLGIKAIWVESDS 344


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