BLASTX nr result
ID: Cimicifuga21_contig00037420
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00037420 (384 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi... 159 2e-37 emb|CBI40590.3| unnamed protein product [Vitis vinifera] 159 2e-37 ref|XP_002523296.1| pentatricopeptide repeat-containing protein,... 132 3e-29 ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containi... 129 2e-28 ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containi... 129 2e-28 >ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08510-like [Vitis vinifera] Length = 512 Score = 159 bits (402), Expect = 2e-37 Identities = 73/93 (78%), Positives = 81/93 (87%) Frame = -2 Query: 281 MNPLKQIHAHTLRNGTDQFKFLIIKLLQIPNIPYAHKLFDIIPQPTAFLYNKLIQAYSSH 102 MN LKQI A+TLRNG + K LI+ LLQIP+IPYAHKLFD IP+PT FLYNKLIQAYSSH Sbjct: 1 MNRLKQIQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSH 60 Query: 101 GPYHQCLQLYSQMCLQRCSPNEHSFTFLFAACA 3 GP+HQC LY+QMCLQ CSPNEHSFTFLF+ACA Sbjct: 61 GPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACA 93 >emb|CBI40590.3| unnamed protein product [Vitis vinifera] Length = 495 Score = 159 bits (402), Expect = 2e-37 Identities = 73/93 (78%), Positives = 81/93 (87%) Frame = -2 Query: 281 MNPLKQIHAHTLRNGTDQFKFLIIKLLQIPNIPYAHKLFDIIPQPTAFLYNKLIQAYSSH 102 MN LKQI A+TLRNG + K LI+ LLQIP+IPYAHKLFD IP+PT FLYNKLIQAYSSH Sbjct: 1 MNRLKQIQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSH 60 Query: 101 GPYHQCLQLYSQMCLQRCSPNEHSFTFLFAACA 3 GP+HQC LY+QMCLQ CSPNEHSFTFLF+ACA Sbjct: 61 GPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACA 93 >ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223537384|gb|EEF39012.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 353 Score = 132 bits (332), Expect = 3e-29 Identities = 61/93 (65%), Positives = 71/93 (76%) Frame = -2 Query: 281 MNPLKQIHAHTLRNGTDQFKFLIIKLLQIPNIPYAHKLFDIIPQPTAFLYNKLIQAYSSH 102 MN LKQIHA+TLRNG D K L +L+QIPN+PYAHKL D+IP P FLYNKLIQAYS Sbjct: 1 MNQLKQIHAYTLRNGIDYNKTLTERLIQIPNVPYAHKLIDLIPSPNVFLYNKLIQAYSFQ 60 Query: 101 GPYHQCLQLYSQMCLQRCSPNEHSFTFLFAACA 3 HQC +YSQM + C+ N+H+FTFLFAACA Sbjct: 61 NQLHQCFSIYSQMRSRNCTGNQHTFTFLFAACA 93 >ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08510-like [Cucumis sativus] Length = 512 Score = 129 bits (324), Expect = 2e-28 Identities = 61/93 (65%), Positives = 73/93 (78%) Frame = -2 Query: 281 MNPLKQIHAHTLRNGTDQFKFLIIKLLQIPNIPYAHKLFDIIPQPTAFLYNKLIQAYSSH 102 MN LKQIHA++LRNG D KFLI KLLQ+P++PYA LFD IP+P+ +LYNK IQ +SS Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSI 60 Query: 101 GPYHQCLQLYSQMCLQRCSPNEHSFTFLFAACA 3 G H+C LY QMC Q CSPN++SFTFLF ACA Sbjct: 61 GHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACA 93 >ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08510-like [Cucumis sativus] Length = 589 Score = 129 bits (324), Expect = 2e-28 Identities = 61/93 (65%), Positives = 73/93 (78%) Frame = -2 Query: 281 MNPLKQIHAHTLRNGTDQFKFLIIKLLQIPNIPYAHKLFDIIPQPTAFLYNKLIQAYSSH 102 MN LKQIHA++LRNG D KFLI KLLQ+P++PYA LFD IP+P+ +LYNK IQ +SS Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSI 60 Query: 101 GPYHQCLQLYSQMCLQRCSPNEHSFTFLFAACA 3 G H+C LY QMC Q CSPN++SFTFLF ACA Sbjct: 61 GHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACA 93