BLASTX nr result

ID: Cimicifuga21_contig00037413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037413
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520359.1| porphobilinogen deaminase, putative [Ricinus...    55   6e-06

>ref|XP_002520359.1| porphobilinogen deaminase, putative [Ricinus communis]
           gi|223540457|gb|EEF42025.1| porphobilinogen deaminase,
           putative [Ricinus communis]
          Length = 372

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -3

Query: 202 SKVPIFEVSPPCLKTHSSDHVRKLMLTRASVSNEHQTQT-KYPLLRIGARGSPLTLTWAC 26
           S +P F+ SP C+K  S      L +TRASV+ E QTQ  K  L+RIG RGSPL L  A 
Sbjct: 28  SSLPQFK-SPNCIKKQS------LRITRASVAVEQQTQDPKVALIRIGTRGSPLALAQAH 80

Query: 25  ETREKLIA 2
           ETR+KL+A
Sbjct: 81  ETRDKLMA 88


Top