BLASTX nr result

ID: Cimicifuga21_contig00037377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037377
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
ref|XP_002303012.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp....    65   6e-09
gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indi...    65   6e-09
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    65   8e-09

>ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -3

Query: 295 FMKLVSKIAGKNIIVRDTNRFHHFRDGSCSCGDFW 191
           FMKLVSK   + IIVRDTNRFHHF+DG CSCG+FW
Sbjct: 584 FMKLVSKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618


>ref|XP_002303012.1| predicted protein [Populus trichocarpa] gi|222844738|gb|EEE82285.1|
           predicted protein [Populus trichocarpa]
          Length = 815

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -3

Query: 292 MKLVSKIAGKNIIVRDTNRFHHFRDGSCSCGDFW 191
           +K++SKI G+ I VRD+NRFHHFRDGSCSCGD+W
Sbjct: 782 IKVISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815


>ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330765|gb|EFH61184.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = -3

Query: 289 KLVSKIAGKNIIVRDTNRFHHFRDGSCSCGDFW 191
           KL+SK+ G+ I+VRDTNRFHHF+DG CSCGD+W
Sbjct: 662 KLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694


>gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indica Group]
          Length = 563

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -3

Query: 292 MKLVSKIAGKNIIVRDTNRFHHFRDGSCSCGDFW 191
           +KL+SKI G+ IIVRD NRFHHFR+GSCSCGDFW
Sbjct: 530 VKLLSKIYGRCIIVRDANRFHHFREGSCSCGDFW 563


>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -3

Query: 289 KLVSKIAGKNIIVRDTNRFHHFRDGSCSCGDFW 191
           K +SK+A + IIVRD NRFHHFRDGSCSCGD+W
Sbjct: 831 KFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863


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