BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037368
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containi...   168   4e-40
ref|XP_002318601.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39
ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   161   6e-38
emb|CBI28530.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago t...   159   2e-37

>ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Glycine max]
          Length = 451

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/122 (64%), Positives = 99/122 (81%)
 Frame = -2

Query: 368 KDVVALELLVSDLRKEHRVMVTETFSLVAETLVKLGREDEAVGIFKNLEKFKCPKDRTAV 189
           KD  A+++L+ DL+KE R M  ETFSLVAE LVKLG+EDEA+GIFKNL+K+KC  D   V
Sbjct: 87  KDYTAMDILMGDLKKEGRAMDAETFSLVAENLVKLGKEDEALGIFKNLDKYKCSIDEFTV 146

Query: 188 IAIVHALCTKGHAKKAEGVVWHHKNEISGVETCIYKSLLHGWCVHGNVKEARRILSEMKA 9
            AIV+ALC+KGH K+AEGVVWHH ++I+G + CIY+SLL+GW V  NVKEARRI+ EMK+
Sbjct: 147 TAIVNALCSKGHGKRAEGVVWHHNDKITGTKPCIYRSLLYGWSVQRNVKEARRIIKEMKS 206

Query: 8   LG 3
            G
Sbjct: 207 NG 208


>ref|XP_002318601.1| predicted protein [Populus trichocarpa] gi|222859274|gb|EEE96821.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  164 bits (416), Expect = 5e-39
 Identities = 84/124 (67%), Positives = 100/124 (80%), Gaps = 2/124 (1%)
 Frame = -2

Query: 368 KDVVALELLVSDLRKEHRVMVTETFSLVAETLVKLGREDEAVGIFKNLEKFKCPKDRTAV 189
           KD   + +L+SDLRKE RVM  +TF+LVAETLVKLGREDEA+GIFKNLEKFKCP+D  AV
Sbjct: 121 KDHTGMRILISDLRKEGRVMDPQTFALVAETLVKLGREDEALGIFKNLEKFKCPQDGFAV 180

Query: 188 IAIVHALCTKGHAKKAEGVVWHHK-NEISGVETC-IYKSLLHGWCVHGNVKEARRILSEM 15
            AI+ ALC KGHAKKA+GV  HHK N+ISG+E C +Y+ LL+GW V  NVKEAR+I+ EM
Sbjct: 181 TAIISALCAKGHAKKAQGVFSHHKNNKISGLEPCVVYRCLLYGWSVQENVKEARKIIQEM 240

Query: 14  KALG 3
           K  G
Sbjct: 241 KGDG 244


>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61370, mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/122 (63%), Positives = 98/122 (80%)
 Frame = -2

Query: 368 KDVVALELLVSDLRKEHRVMVTETFSLVAETLVKLGREDEAVGIFKNLEKFKCPKDRTAV 189
           KD+ A+++LVSDL  E R M  +TF +VAETLV LGRED+A+G+FKNL+KFKC  D   V
Sbjct: 120 KDLKAIDILVSDLSNEGREMKAQTFGIVAETLVSLGREDDALGLFKNLDKFKCSYDSVTV 179

Query: 188 IAIVHALCTKGHAKKAEGVVWHHKNEISGVETCIYKSLLHGWCVHGNVKEARRILSEMKA 9
            AIV+ALC+KGHA++AEGVV HHK++I GV+ CIY+SL +GW    NVKEARRIL EMK+
Sbjct: 180 TAIVNALCSKGHARRAEGVVRHHKDKILGVKPCIYRSLFYGWSEQKNVKEARRILKEMKS 239

Query: 8   LG 3
           +G
Sbjct: 240 VG 241


>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/122 (63%), Positives = 98/122 (80%)
 Frame = -2

Query: 368 KDVVALELLVSDLRKEHRVMVTETFSLVAETLVKLGREDEAVGIFKNLEKFKCPKDRTAV 189
           KD+ A+++LVSDL  E R M  +TF +VAETLV LGRED+A+G+FKNL+KFKC  D   V
Sbjct: 89  KDLKAIDILVSDLSNEGREMKAQTFGIVAETLVSLGREDDALGLFKNLDKFKCSYDSVTV 148

Query: 188 IAIVHALCTKGHAKKAEGVVWHHKNEISGVETCIYKSLLHGWCVHGNVKEARRILSEMKA 9
            AIV+ALC+KGHA++AEGVV HHK++I GV+ CIY+SL +GW    NVKEARRIL EMK+
Sbjct: 149 TAIVNALCSKGHARRAEGVVRHHKDKILGVKPCIYRSLFYGWSEQKNVKEARRILKEMKS 208

Query: 8   LG 3
           +G
Sbjct: 209 VG 210


>ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497182|gb|AES78385.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 563

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/122 (59%), Positives = 96/122 (78%)
 Frame = -2

Query: 368 KDVVALELLVSDLRKEHRVMVTETFSLVAETLVKLGREDEAVGIFKNLEKFKCPKDRTAV 189
           KD  A+++L+ D +K+ RVM  +TF +VAET VKLG+EDEA+GIFKNL+K+KC  D   V
Sbjct: 194 KDYTAMDILLGDFKKQGRVMEAQTFGVVAETYVKLGKEDEALGIFKNLDKYKCLIDEFTV 253

Query: 188 IAIVHALCTKGHAKKAEGVVWHHKNEISGVETCIYKSLLHGWCVHGNVKEARRILSEMKA 9
            AI++ALC+KGHAK+AEGV WHHK++I G   C+Y+SLL+GW +  NVKE+RRI+ EMK 
Sbjct: 254 TAIINALCSKGHAKRAEGVAWHHKDKIKGALPCVYRSLLYGWSLERNVKESRRIIQEMKT 313

Query: 8   LG 3
            G
Sbjct: 314 NG 315