BLASTX nr result

ID: Cimicifuga21_contig00037340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037340
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002458511.1| hypothetical protein SORBIDRAFT_03g034920 [S...   103   7e-22
ref|XP_002443280.1| hypothetical protein SORBIDRAFT_08g016890 [S...   103   8e-22
ref|XP_002443644.1| hypothetical protein SORBIDRAFT_08g022750 [S...   102   3e-21
ref|XP_002459817.1| hypothetical protein SORBIDRAFT_02g011180 [S...   102   5e-21
ref|XP_002464683.1| hypothetical protein SORBIDRAFT_01g023250 [S...   102   5e-21

>ref|XP_002458511.1| hypothetical protein SORBIDRAFT_03g034920 [Sorghum bicolor]
           gi|241930486|gb|EES03631.1| hypothetical protein
           SORBIDRAFT_03g034920 [Sorghum bicolor]
          Length = 687

 Score =  103 bits (258), Expect(2) = 7e-22
 Identities = 43/67 (64%), Positives = 55/67 (82%)
 Frame = -2

Query: 203 PMYDMLRKADTDKPCLHLIYDMWDTMIEKVKVAIYRHEGKEDHELSDFYSVVHQILVDRW 24
           P+Y+M+R  DTD PCLHL+Y+MWD+MIEKVK  IYR+EGK++ E SD YSV++ IL+ RW
Sbjct: 405 PIYEMIRLTDTDTPCLHLVYEMWDSMIEKVKKVIYRYEGKQEDEQSDLYSVIYDILIARW 464

Query: 23  TKNNTPL 3
           TK N PL
Sbjct: 465 TKGNNPL 471



 Score = 24.6 bits (52), Expect(2) = 7e-22
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 244 LWWGKVDYIL 215
           +WW KVDYIL
Sbjct: 391 VWWDKVDYIL 400


>ref|XP_002443280.1| hypothetical protein SORBIDRAFT_08g016890 [Sorghum bicolor]
           gi|241943973|gb|EES17118.1| hypothetical protein
           SORBIDRAFT_08g016890 [Sorghum bicolor]
          Length = 212

 Score =  103 bits (258), Expect(2) = 8e-22
 Identities = 43/67 (64%), Positives = 55/67 (82%)
 Frame = -2

Query: 203 PMYDMLRKADTDKPCLHLIYDMWDTMIEKVKVAIYRHEGKEDHELSDFYSVVHQILVDRW 24
           P+Y+M+R  DTD PCLHL+Y+MWD+MIEKVK  IYR+EGK++ E SD YSV++ IL+ RW
Sbjct: 88  PIYEMIRMTDTDTPCLHLVYEMWDSMIEKVKEVIYRYEGKQEDEESDLYSVIYDILIARW 147

Query: 23  TKNNTPL 3
           TK N PL
Sbjct: 148 TKGNNPL 154



 Score = 24.6 bits (52), Expect(2) = 8e-22
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 244 LWWGKVDYIL 215
           +WW KVDYIL
Sbjct: 74  VWWDKVDYIL 83


>ref|XP_002443644.1| hypothetical protein SORBIDRAFT_08g022750 [Sorghum bicolor]
           gi|241944337|gb|EES17482.1| hypothetical protein
           SORBIDRAFT_08g022750 [Sorghum bicolor]
          Length = 684

 Score =  102 bits (253), Expect(2) = 3e-21
 Identities = 42/67 (62%), Positives = 54/67 (80%)
 Frame = -2

Query: 203 PMYDMLRKADTDKPCLHLIYDMWDTMIEKVKVAIYRHEGKEDHELSDFYSVVHQILVDRW 24
           P+Y+M+R  DTD PCLHL+Y+MWD+MIEKVK  IYR+EGK++ E SD YSV++ IL+ RW
Sbjct: 404 PIYEMIRLTDTDTPCLHLVYEMWDSMIEKVKKVIYRYEGKQEDEQSDLYSVIYDILIARW 463

Query: 23  TKNNTPL 3
           T  N PL
Sbjct: 464 TNGNNPL 470



 Score = 24.6 bits (52), Expect(2) = 3e-21
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 244 LWWGKVDYIL 215
           +WW KVDYIL
Sbjct: 390 VWWDKVDYIL 399


>ref|XP_002459817.1| hypothetical protein SORBIDRAFT_02g011180 [Sorghum bicolor]
           gi|241923194|gb|EER96338.1| hypothetical protein
           SORBIDRAFT_02g011180 [Sorghum bicolor]
          Length = 647

 Score =  102 bits (255), Expect(2) = 5e-21
 Identities = 43/67 (64%), Positives = 55/67 (82%)
 Frame = -2

Query: 203 PMYDMLRKADTDKPCLHLIYDMWDTMIEKVKVAIYRHEGKEDHELSDFYSVVHQILVDRW 24
           P+Y+M+R  DTD PCLHL+Y+MWD+MIE VK AIYR+EGK++ E SD YSV++ IL+ RW
Sbjct: 367 PIYEMIRITDTDTPCLHLVYEMWDSMIENVKKAIYRYEGKQEDEHSDLYSVIYDILIARW 426

Query: 23  TKNNTPL 3
           TK N PL
Sbjct: 427 TKGNNPL 433



 Score = 23.1 bits (48), Expect(2) = 5e-21
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 244 LWWGKVDYIL 215
           +WW KVD+IL
Sbjct: 353 VWWDKVDFIL 362


>ref|XP_002464683.1| hypothetical protein SORBIDRAFT_01g023250 [Sorghum bicolor]
           gi|241918537|gb|EER91681.1| hypothetical protein
           SORBIDRAFT_01g023250 [Sorghum bicolor]
          Length = 647

 Score =  102 bits (255), Expect(2) = 5e-21
 Identities = 43/67 (64%), Positives = 55/67 (82%)
 Frame = -2

Query: 203 PMYDMLRKADTDKPCLHLIYDMWDTMIEKVKVAIYRHEGKEDHELSDFYSVVHQILVDRW 24
           P+Y+M+R  DTD PCLHL+Y+MWD+MIE VK AIYR+EGK++ E SD YSV++ IL+ RW
Sbjct: 367 PIYEMIRITDTDTPCLHLVYEMWDSMIENVKKAIYRYEGKQEDEHSDLYSVIYDILIARW 426

Query: 23  TKNNTPL 3
           TK N PL
Sbjct: 427 TKGNNPL 433



 Score = 23.1 bits (48), Expect(2) = 5e-21
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 244 LWWGKVDYIL 215
           +WW KVD+IL
Sbjct: 353 VWWDKVDFIL 362


Top