BLASTX nr result

ID: Cimicifuga21_contig00037335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037335
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518797.1| conserved hypothetical protein [Ricinus comm...    59   4e-07
ref|XP_002285039.1| PREDICTED: nodulation protein H [Vitis vinif...    58   7e-07
ref|XP_003632512.1| PREDICTED: uncharacterized protein LOC100254...    56   3e-06
ref|XP_002281772.1| PREDICTED: uncharacterized protein LOC100254...    56   3e-06
ref|XP_002327114.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002518797.1| conserved hypothetical protein [Ricinus communis]
           gi|223542178|gb|EEF43722.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 368

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = -3

Query: 114 MADDLWVFNKDCFIIKTPKKSPLLLRTVVFVFSMVCGV 1
           MADDL  F+KD FIIK+PKKSPL+LR VV  F MVCGV
Sbjct: 1   MADDLCFFSKDAFIIKSPKKSPLVLRMVVLAFVMVCGV 38


>ref|XP_002285039.1| PREDICTED: nodulation protein H [Vitis vinifera]
           gi|297741312|emb|CBI32443.3| unnamed protein product
           [Vitis vinifera]
          Length = 344

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/38 (68%), Positives = 30/38 (78%)
 Frame = -3

Query: 114 MADDLWVFNKDCFIIKTPKKSPLLLRTVVFVFSMVCGV 1
           MADDL  F KD F+ K PKKSPL+LR +V VF+MVCGV
Sbjct: 1   MADDLCFFTKDSFVFKAPKKSPLVLRMIVLVFAMVCGV 38


>ref|XP_003632512.1| PREDICTED: uncharacterized protein LOC100254393 isoform 2 [Vitis
           vinifera] gi|296082441|emb|CBI21446.3| unnamed protein
           product [Vitis vinifera]
          Length = 362

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/38 (71%), Positives = 29/38 (76%)
 Frame = -3

Query: 114 MADDLWVFNKDCFIIKTPKKSPLLLRTVVFVFSMVCGV 1
           MA+DL  FNKD  IIK PKKSP LLR  V VF+MVCGV
Sbjct: 1   MAEDLCFFNKDTLIIKPPKKSPKLLRMTVLVFAMVCGV 38


>ref|XP_002281772.1| PREDICTED: uncharacterized protein LOC100254393 isoform 1 [Vitis
           vinifera]
          Length = 340

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/38 (71%), Positives = 29/38 (76%)
 Frame = -3

Query: 114 MADDLWVFNKDCFIIKTPKKSPLLLRTVVFVFSMVCGV 1
           MA+DL  FNKD  IIK PKKSP LLR  V VF+MVCGV
Sbjct: 1   MAEDLCFFNKDTLIIKPPKKSPKLLRMTVLVFAMVCGV 38


>ref|XP_002327114.1| predicted protein [Populus trichocarpa] gi|222835429|gb|EEE73864.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = -3

Query: 114 MADDLWVFNKDCFIIKTPKKSPLLLRTVVFVFSMVCGV 1
           M +DL  FNKD  +IK PKKSPLLLR VV  F+MVCGV
Sbjct: 1   MTEDLCFFNKDALVIKGPKKSPLLLRLVVVAFAMVCGV 38


Top