BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037334
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata] g...   139   2e-31
ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   138   4e-31
ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
ref|NP_198787.1| pentatricopeptide repeat-containing protein [Ar...   138   4e-31

>ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  150 bits (378), Expect = 1e-34
 Identities = 79/135 (58%), Positives = 99/135 (73%)
 Frame = -2

Query: 406 EQAYTFLKRHQTPQLHSLSFQFTPQAASHFLLNSQFDQNLTLKFLNWAHNHPFFDFHPKC 227
           ++A T LK H    L SLS +FTPQ+AS+FLL SQFDQ LTLKFL WA NHPFFD H KC
Sbjct: 35  DKAITLLKFHPH-HLDSLSSRFTPQSASYFLLKSQFDQTLTLKFLTWARNHPFFDSHCKC 93

Query: 226 LALHILTNFKLYKSAQSLAEQLVSNNKTADYDDTAIATSIFDCLKLTYHQCNSTSSVFDL 47
           L+LHILT FKLYK+AQ+LA++L  +            +SIF CLK +YH  NS+S+VFDL
Sbjct: 94  LSLHILTRFKLYKTAQTLAQELALSASDPS------GSSIFQCLKDSYHVYNSSSAVFDL 147

Query: 46  LVKSYANLGMIKRAL 2
           +VKSY++L MI +A+
Sbjct: 148 MVKSYSHLNMIDQAV 162


>ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
           gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 747

 Score =  139 bits (351), Expect = 2e-31
 Identities = 78/136 (57%), Positives = 97/136 (71%)
 Frame = -2

Query: 409 AEQAYTFLKRHQTPQLHSLSFQFTPQAASHFLLNSQFDQNLTLKFLNWAHNHPFFDFHPK 230
           A++A TFLKRH   QLH LS  FTP+AAS+ LL SQ +Q L LKFL WA+ H FF    K
Sbjct: 25  ADKALTFLKRHPY-QLHHLSANFTPEAASNLLLKSQNNQELILKFLTWANPHQFFTLRCK 83

Query: 229 CLALHILTNFKLYKSAQSLAEQLVSNNKTADYDDTAIATSIFDCLKLTYHQCNSTSSVFD 50
           C+ LHILT FKLYK+AQ+LAE + +  KT D +D   A+ +F  L+ TY  CNSTSSVFD
Sbjct: 84  CITLHILTRFKLYKTAQTLAEDVAA--KTLDDED---ASLVFRSLQETYDLCNSTSSVFD 138

Query: 49  LLVKSYANLGMIKRAL 2
           L+VKSY+ L +I +AL
Sbjct: 139 LVVKSYSRLCLIDKAL 154


>ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  138 bits (348), Expect = 4e-31
 Identities = 74/136 (54%), Positives = 97/136 (71%)
 Frame = -2

Query: 409 AEQAYTFLKRHQTPQLHSLSFQFTPQAASHFLLNSQFDQNLTLKFLNWAHNHPFFDFHPK 230
           A++A  +L+RH   QL  LS  FTPQA+S+ LL SQFD +L LKFL+WA +  FF F  K
Sbjct: 24  ADKAIVYLRRHPE-QLTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQFFSFQCK 82

Query: 229 CLALHILTNFKLYKSAQSLAEQLVSNNKTADYDDTAIATSIFDCLKLTYHQCNSTSSVFD 50
           CLALHILT +KLYK+AQSLAE++V N      D+T     +F CLK +Y+QC S+S+VFD
Sbjct: 83  CLALHILTRYKLYKTAQSLAEEVVVNT----VDET--GEDLFQCLKNSYYQCKSSSAVFD 136

Query: 49  LLVKSYANLGMIKRAL 2
           L+VKS A + +I +AL
Sbjct: 137 LVVKSCARVNLINKAL 152


>ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  138 bits (348), Expect = 4e-31
 Identities = 74/136 (54%), Positives = 97/136 (71%)
 Frame = -2

Query: 409 AEQAYTFLKRHQTPQLHSLSFQFTPQAASHFLLNSQFDQNLTLKFLNWAHNHPFFDFHPK 230
           A++A  +L+RH   QL  LS  FTPQA+S+ LL SQFD +L LKFL+WA +  FF F  K
Sbjct: 24  ADKAIVYLRRHPE-QLTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQFFSFQCK 82

Query: 229 CLALHILTNFKLYKSAQSLAEQLVSNNKTADYDDTAIATSIFDCLKLTYHQCNSTSSVFD 50
           CLALHILT +KLYK+AQSLAE++V N      D+T     +F CLK +Y+QC S+S+VFD
Sbjct: 83  CLALHILTRYKLYKTAQSLAEEVVVNT----VDET--GEDLFQCLKNSYYQCKSSSAVFD 136

Query: 49  LLVKSYANLGMIKRAL 2
           L+VKS A + +I +AL
Sbjct: 137 LVVKSCARVNLINKAL 152


>ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
           gi|10177971|dbj|BAB11377.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007083|gb|AED94466.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 747

 Score =  138 bits (348), Expect = 4e-31
 Identities = 76/136 (55%), Positives = 93/136 (68%)
 Frame = -2

Query: 409 AEQAYTFLKRHQTPQLHSLSFQFTPQAASHFLLNSQFDQNLTLKFLNWAHNHPFFDFHPK 230
           A++A TFLKRH   QLH LS  FTP+AAS+ LL SQ DQ L LKFLNWA+ H FF    K
Sbjct: 25  ADKALTFLKRHPY-QLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCK 83

Query: 229 CLALHILTNFKLYKSAQSLAEQLVSNNKTADYDDTAIATSIFDCLKLTYHQCNSTSSVFD 50
           C+ LHILT FKLYK+AQ LAE + +     +Y     A+ +F  L+ TY  C STSSVFD
Sbjct: 84  CITLHILTKFKLYKTAQILAEDVAAKTLDDEY-----ASLVFKSLQETYDLCYSTSSVFD 138

Query: 49  LLVKSYANLGMIKRAL 2
           L+VKSY+ L +I +AL
Sbjct: 139 LVVKSYSRLSLIDKAL 154