BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037302
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37206.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_002890989.1| predicted protein [Arabidopsis lyrata subsp....    88   6e-16
gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical ...    86   3e-15
ref|NP_564401.1| pentatricopeptide repeat-containing protein [Ar...    86   3e-15

>emb|CBI37206.3| unnamed protein product [Vitis vinifera]
          Length = 664

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
 Frame = -1

Query: 236 SNAHHDSSETFLLQCLSQKRLQEARNLLDKMPQRG---SVVHCTSLLSKYAKDGFVDEAR 66
           S    D S+  +L+CLSQ+RL+EAR++LD+MP RG    VV  TSLLSK++K+GF+DEAR
Sbjct: 39  SKLRFDDSQ--ILECLSQQRLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEAR 96

Query: 65  TLFELMPVRNVVTHNAMLLAY 3
            LFE+MP RNVVT+NAML  Y
Sbjct: 97  ALFEIMPERNVVTYNAMLSGY 117


>ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
           mitochondrial-like [Vitis vinifera]
          Length = 743

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
 Frame = -1

Query: 236 SNAHHDSSETFLLQCLSQKRLQEARNLLDKMPQRG---SVVHCTSLLSKYAKDGFVDEAR 66
           S    D S+  +L+CLSQ+RL+EAR++LD+MP RG    VV  TSLLSK++K+GF+DEAR
Sbjct: 39  SKLRFDDSQ--ILECLSQQRLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEAR 96

Query: 65  TLFELMPVRNVVTHNAMLLAY 3
            LFE+MP RNVVT+NAML  Y
Sbjct: 97  ALFEIMPERNVVTYNAMLSGY 117


>ref|XP_002890989.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336831|gb|EFH67248.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 792

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/75 (60%), Positives = 58/75 (77%), Gaps = 3/75 (4%)
 Frame = -1

Query: 218 SSETFLLQCLSQKRLQEARNLLDKMPQRGS---VVHCTSLLSKYAKDGFVDEARTLFELM 48
           + E  +L+ LS+  L  AR+LLDK+PQRGS   V++CTSLL+KYAK G++DEAR LFE+M
Sbjct: 74  NEEALILRRLSEGGLVHARHLLDKIPQRGSISRVIYCTSLLTKYAKAGYLDEARVLFEVM 133

Query: 47  PVRNVVTHNAMLLAY 3
           P RN+VT NAML  Y
Sbjct: 134 PERNIVTCNAMLTGY 148


>gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical protein F19I3.26 gi|7485810
           from Arabidopsis thaliana BAC F19I3 gb|AC004238. It
           contains a PPR repeat domain PF|01535. ESTs gb|AV539170,
           gb|AV551571, gb|AA597781, gb|AV544524, gb|AV531577 and
           gb|AV533492 come from this gene [Arabidopsis thaliana]
          Length = 864

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/75 (61%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
 Frame = -1

Query: 218 SSETFLLQCLSQKRLQEARNLLDKMPQRGS---VVHCTSLLSKYAKDGFVDEARTLFELM 48
           + E  +L+ LS+  L  AR+LLDK+PQRGS   VV+ TSLLSKYAK G++DEAR LFE+M
Sbjct: 147 NEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVM 206

Query: 47  PVRNVVTHNAMLLAY 3
           P RN+VT NAML  Y
Sbjct: 207 PERNIVTCNAMLTGY 221


>ref|NP_564401.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806407|sp|P0C7R0.1|PPR69_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g32415, mitochondrial; Flags: Precursor
           gi|332193363|gb|AEE31484.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/75 (61%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
 Frame = -1

Query: 218 SSETFLLQCLSQKRLQEARNLLDKMPQRGS---VVHCTSLLSKYAKDGFVDEARTLFELM 48
           + E  +L+ LS+  L  AR+LLDK+PQRGS   VV+ TSLLSKYAK G++DEAR LFE+M
Sbjct: 44  NEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVM 103

Query: 47  PVRNVVTHNAMLLAY 3
           P RN+VT NAML  Y
Sbjct: 104 PERNIVTCNAMLTGY 118