BLASTX nr result

ID: Cimicifuga21_contig00037275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037275
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ84552.1| expansin 4, partial [Populus tremula]                  169   2e-40
ref|XP_002514405.1| Alpha-expansin 20 precursor, putative [Ricin...   169   3e-40
gb|AEX34710.2| expansine 4, partial [Populus laurifolia] gi|4293...   168   5e-40
gb|AEX34709.2| expansine 4, partial [Populus deltoides]               168   5e-40
gb|AFZ84551.1| expansin 4, partial [Populus alba]                     167   6e-40

>gb|AFZ84552.1| expansin 4, partial [Populus tremula]
          Length = 240

 Score =  169 bits (428), Expect = 2e-40
 Identities = 75/99 (75%), Positives = 89/99 (89%)
 Frame = -2

Query: 298 WCLQGSPSIIVTATDFCPPNYGLANDYGGWCNFPRQHFEMSEMAFAEIAMRKADIVPIQY 119
           WCLQGSPS+I+TATDFCPPNYGL++DYGGWCNFP++HFEMSE AFAEIA +KADIVP+Q+
Sbjct: 79  WCLQGSPSVILTATDFCPPNYGLSSDYGGWCNFPKEHFEMSEAAFAEIAEKKADIVPVQH 138

Query: 118 RR*EC*IRGGLRFTIMGTSYFYQVLITNVGMDGVVAAVK 2
           RR +C  RGGLRFT+ G  +FYQVLI+NVG+DG V AVK
Sbjct: 139 RRVKCDRRGGLRFTVSGNFHFYQVLISNVGLDGEVIAVK 177


>ref|XP_002514405.1| Alpha-expansin 20 precursor, putative [Ricinus communis]
           gi|223546502|gb|EEF48001.1| Alpha-expansin 20 precursor,
           putative [Ricinus communis]
          Length = 251

 Score =  169 bits (427), Expect = 3e-40
 Identities = 74/99 (74%), Positives = 87/99 (87%)
 Frame = -2

Query: 298 WCLQGSPSIIVTATDFCPPNYGLANDYGGWCNFPRQHFEMSEMAFAEIAMRKADIVPIQY 119
           WCLQGSPS+I+TAT+FCPPNYGL+ DYGGWCNFP++HFEMSE AFAEIA RKAD+VP+QY
Sbjct: 90  WCLQGSPSVILTATNFCPPNYGLSADYGGWCNFPKEHFEMSEAAFAEIAERKADVVPVQY 149

Query: 118 RR*EC*IRGGLRFTIMGTSYFYQVLITNVGMDGVVAAVK 2
           RR  C  +GGLRFT+ G  +FYQVL+TNVG+DG V AVK
Sbjct: 150 RRVNCDRKGGLRFTVSGNFHFYQVLVTNVGLDGEVVAVK 188


>gb|AEX34710.2| expansine 4, partial [Populus laurifolia]
           gi|429345739|gb|AFZ84550.1| expansin 4, partial [Populus
           maximowiczii]
          Length = 240

 Score =  168 bits (425), Expect = 5e-40
 Identities = 74/99 (74%), Positives = 89/99 (89%)
 Frame = -2

Query: 298 WCLQGSPSIIVTATDFCPPNYGLANDYGGWCNFPRQHFEMSEMAFAEIAMRKADIVPIQY 119
           WCLQGSPS+I+TATDFCPPNYGL++DYGGWCNFP++HFEMSE AFAEIA +KAD+VP+Q+
Sbjct: 79  WCLQGSPSVILTATDFCPPNYGLSSDYGGWCNFPKEHFEMSEAAFAEIAEKKADVVPVQH 138

Query: 118 RR*EC*IRGGLRFTIMGTSYFYQVLITNVGMDGVVAAVK 2
           RR +C  RGGLRFT+ G  +FYQVLI+NVG+DG V AVK
Sbjct: 139 RRVKCDRRGGLRFTMSGNFHFYQVLISNVGLDGEVIAVK 177


>gb|AEX34709.2| expansine 4, partial [Populus deltoides]
          Length = 236

 Score =  168 bits (425), Expect = 5e-40
 Identities = 74/99 (74%), Positives = 89/99 (89%)
 Frame = -2

Query: 298 WCLQGSPSIIVTATDFCPPNYGLANDYGGWCNFPRQHFEMSEMAFAEIAMRKADIVPIQY 119
           WCLQGSPS+I+TATDFCPPNYGL++DYGGWCNFP++HFEMSE AFAEIA +KAD+VP+Q+
Sbjct: 75  WCLQGSPSVILTATDFCPPNYGLSSDYGGWCNFPKEHFEMSEAAFAEIAEKKADVVPVQH 134

Query: 118 RR*EC*IRGGLRFTIMGTSYFYQVLITNVGMDGVVAAVK 2
           RR +C  RGGLRFT+ G  +FYQVLI+NVG+DG V AVK
Sbjct: 135 RRVKCDRRGGLRFTMSGNFHFYQVLISNVGLDGEVIAVK 173


>gb|AFZ84551.1| expansin 4, partial [Populus alba]
          Length = 240

 Score =  167 bits (424), Expect = 6e-40
 Identities = 74/99 (74%), Positives = 88/99 (88%)
 Frame = -2

Query: 298 WCLQGSPSIIVTATDFCPPNYGLANDYGGWCNFPRQHFEMSEMAFAEIAMRKADIVPIQY 119
           WCLQGSPS+ +TATDFCPPNYGL++DYGGWCNFP++HFEMSE AFAEIA +KADIVP+Q+
Sbjct: 79  WCLQGSPSVFLTATDFCPPNYGLSSDYGGWCNFPKEHFEMSEAAFAEIAEKKADIVPVQH 138

Query: 118 RR*EC*IRGGLRFTIMGTSYFYQVLITNVGMDGVVAAVK 2
           RR +C  RGGLRFT+ G  +FYQVLI+NVG+DG V AVK
Sbjct: 139 RRVKCDRRGGLRFTVSGNFHFYQVLISNVGLDGEVIAVK 177


Top