BLASTX nr result

ID: Cimicifuga21_contig00037261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037261
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15337.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_003621771.1| F-box family protein [Medicago truncatula] g...    60   1e-07
ref|XP_003550059.1| PREDICTED: F-box/kelch-repeat protein At3g06...    60   2e-07
gb|ACU19299.1| unknown [Glycine max]                                   60   2e-07

>emb|CBI15337.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/57 (52%), Positives = 42/57 (73%)
 Frame = -1

Query: 198 DFPSDILSEILSRLPIETLMRSKSVCKSWYTLISDPHFIDLQRNKASCQPCRIILTP 28
           D   +++SEILSRLPIE ++R +SVCK+W ++I  P FI+LQ  K+  QP R+IL P
Sbjct: 153 DLLPELISEILSRLPIELILRCRSVCKTWNSVIQSPLFINLQARKSHNQPSRVILKP 209


>ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|222852965|gb|EEE90512.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
 Frame = -1

Query: 222 NYKNDRTVD--FPSDILSEILSRLPIETLMRSKSVCKSWYTLISDPHFIDLQRNKASCQP 49
           NY +D   +   P ++  E+L+RLP+E+++R +SVCKSW  +I  P+FI LQ      +P
Sbjct: 10  NYNDDAQGEAILPPEMFCEVLARLPVESILRFRSVCKSWCRMIQSPYFISLQLGVTKNKP 69

Query: 48  CRIIL 34
           CR I+
Sbjct: 70  CRFIV 74


>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
           gi|355496786|gb|AES77989.1| F-box family protein
           [Medicago truncatula]
          Length = 524

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/48 (52%), Positives = 37/48 (77%)
 Frame = -1

Query: 192 PSDILSEILSRLPIETLMRSKSVCKSWYTLISDPHFIDLQRNKASCQP 49
           P ++++EILSRLP+ +LM+ K VCKSW T+ISDP FI +  N+++  P
Sbjct: 95  PDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKMHLNRSARNP 142


>ref|XP_003550059.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 394

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/44 (54%), Positives = 36/44 (81%)
 Frame = -1

Query: 216 KNDRTVDFPSDILSEILSRLPIETLMRSKSVCKSWYTLISDPHF 85
           +N++ VD P +++ EIL RLP+++L+R K+VCKSW + ISDPHF
Sbjct: 25  ENEKMVDLPQELIHEILLRLPVKSLIRFKTVCKSWLSHISDPHF 68


>gb|ACU19299.1| unknown [Glycine max]
          Length = 394

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/44 (54%), Positives = 36/44 (81%)
 Frame = -1

Query: 216 KNDRTVDFPSDILSEILSRLPIETLMRSKSVCKSWYTLISDPHF 85
           +N++ VD P +++ EIL RLP+++L+R K+VCKSW + ISDPHF
Sbjct: 25  ENEKMVDLPQELIHEILLRLPVKSLIRFKTVCKSWLSHISDPHF 68


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