BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037250
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   114   8e-24
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   114   8e-24
ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...   108   3e-22
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...   108   3e-22
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h...   105   4e-21

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
           [Vitis vinifera]
          Length = 2177

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/82 (69%), Positives = 63/82 (76%)
 Frame = +3

Query: 3   GQRQLLDLESLAFQQAGFLRESKNPVLHTGSYIARTKDYEEVHVLALKPKPLAPGEELIK 182
           GQRQLLDL+ +AF Q GFL  +K   L TGSY   +K YEEVHV ALK   L PGEEL+K
Sbjct: 435 GQRQLLDLDGIAFHQGGFLMANKKCELPTGSYRHHSKGYEEVHVPALKAAALGPGEELVK 494

Query: 183 ISVIPDWAQPAFKGMTQLNRVQ 248
           IS +PDWAQPAFKGMTQLNRVQ
Sbjct: 495 ISAMPDWAQPAFKGMTQLNRVQ 516


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/82 (69%), Positives = 63/82 (76%)
 Frame = +3

Query: 3   GQRQLLDLESLAFQQAGFLRESKNPVLHTGSYIARTKDYEEVHVLALKPKPLAPGEELIK 182
           GQRQLLDL+ +AF Q GFL  +K   L TGSY   +K YEEVHV ALK   L PGEEL+K
Sbjct: 402 GQRQLLDLDGIAFHQGGFLMANKKCELPTGSYRHHSKGYEEVHVPALKAAALGPGEELVK 461

Query: 183 ISVIPDWAQPAFKGMTQLNRVQ 248
           IS +PDWAQPAFKGMTQLNRVQ
Sbjct: 462 ISAMPDWAQPAFKGMTQLNRVQ 483


>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
           [Glycine max]
          Length = 2183

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/82 (65%), Positives = 62/82 (75%)
 Frame = +3

Query: 3   GQRQLLDLESLAFQQAGFLRESKNPVLHTGSYIARTKDYEEVHVLALKPKPLAPGEELIK 182
           GQRQ+LDL+S+AF Q GF    K   L  GSY   +K YEE+HV ALK KPL P E+L+K
Sbjct: 439 GQRQMLDLDSIAFAQGGFFMAKKKCDLPDGSYRHLSKGYEEIHVPALKAKPLDPNEKLVK 498

Query: 183 ISVIPDWAQPAFKGMTQLNRVQ 248
           IS +PDWAQPAFKGMTQLNRVQ
Sbjct: 499 ISSMPDWAQPAFKGMTQLNRVQ 520


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
           [Glycine max]
          Length = 2183

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/82 (65%), Positives = 62/82 (75%)
 Frame = +3

Query: 3   GQRQLLDLESLAFQQAGFLRESKNPVLHTGSYIARTKDYEEVHVLALKPKPLAPGEELIK 182
           GQRQ+LDL+S+AF Q GF    K   L  GSY   +K YEE+HV ALK KPL P E+L+K
Sbjct: 439 GQRQMLDLDSIAFTQGGFFMAKKKCDLPDGSYRHLSKGYEEIHVPALKAKPLDPNEKLVK 498

Query: 183 ISVIPDWAQPAFKGMTQLNRVQ 248
           IS +PDWAQPAFKGMTQLNRVQ
Sbjct: 499 ISSMPDWAQPAFKGMTQLNRVQ 520


>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
           truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
           ribonucleoprotein 200 kDa helicase [Medicago truncatula]
          Length = 2223

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/82 (63%), Positives = 60/82 (73%)
 Frame = +3

Query: 3   GQRQLLDLESLAFQQAGFLRESKNPVLHTGSYIARTKDYEEVHVLALKPKPLAPGEELIK 182
           GQRQ+LDL++L F+Q G     K   L  GSY    K YEE+HV ALK KPL P E+L+K
Sbjct: 447 GQRQMLDLDNLTFEQGGLFMAKKKCDLPDGSYRHLEKGYEEIHVPALKAKPLDPNEKLLK 506

Query: 183 ISVIPDWAQPAFKGMTQLNRVQ 248
           IS +PDWAQPAFKGMTQLNRVQ
Sbjct: 507 ISAMPDWAQPAFKGMTQLNRVQ 528