BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037189
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit...   117   1e-24
emb|CBI28264.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus co...   113   1e-23
ref|XP_002450312.1| hypothetical protein SORBIDRAFT_05g003580 [S...   112   2e-23
ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit...   111   7e-23

>ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
          Length = 1072

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
 Frame = -1

Query: 272 MGVPSFYRWLVNKYPNVAVQAKQPKXXXXXXXXXXXDSSFDNLYLDMNGIIHPCFHPDDQ 93
           MGVPSFYRWLVNKYP + V+A + +              FDNLYLDMNGIIHPCFHP+DQ
Sbjct: 1   MGVPSFYRWLVNKYPEIVVRAVEDERESSSANPNGI--EFDNLYLDMNGIIHPCFHPEDQ 58

Query: 92  -DPPTTFDEVFQIIFEYIDWLFKIVRPKKLL 3
             PPTTF+EVF  ++EYID +F IVRP+KLL
Sbjct: 59  IFPPTTFEEVFNNMYEYIDRIFSIVRPRKLL 89


>emb|CBI28264.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
 Frame = -1

Query: 272 MGVPSFYRWLVNKYPNVAVQAKQPKXXXXXXXXXXXDSSFDNLYLDMNGIIHPCFHPDDQ 93
           MGVPSFYRWLVNKYP + V+A + +              FDNLYLDMNGIIHPCFHP+DQ
Sbjct: 1   MGVPSFYRWLVNKYPEIVVRAVEDERESSSANPNGI--EFDNLYLDMNGIIHPCFHPEDQ 58

Query: 92  -DPPTTFDEVFQIIFEYIDWLFKIVRPKKLL 3
             PPTTF+EVF  ++EYID +F IVRP+KLL
Sbjct: 59  IFPPTTFEEVFNNMYEYIDRIFSIVRPRKLL 89


>ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
           gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease,
           putative [Ricinus communis]
          Length = 993

 Score =  113 bits (283), Expect = 1e-23
 Identities = 56/91 (61%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
 Frame = -1

Query: 272 MGVPSFYRWLVNKYPNVAVQAKQPKXXXXXXXXXXXDSSFDNLYLDMNGIIHPCFHPDDQ 93
           MGVP+FY+WLVNKYPNV + +  P               FDNLYLDMNGIIHPCFHPDD 
Sbjct: 1   MGVPAFYKWLVNKYPNV-ITSPNPNGL-----------EFDNLYLDMNGIIHPCFHPDDH 48

Query: 92  -DPPTTFDEVFQIIFEYIDWLFKIVRPKKLL 3
             PPTTFDEVF  I++YID +F IVRP+ LL
Sbjct: 49  PSPPTTFDEVFNNIYKYIDHIFSIVRPRNLL 79


>ref|XP_002450312.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
           gi|241936155|gb|EES09300.1| hypothetical protein
           SORBIDRAFT_05g003580 [Sorghum bicolor]
          Length = 696

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/108 (54%), Positives = 67/108 (62%), Gaps = 18/108 (16%)
 Frame = -1

Query: 272 MGVPSFYRWLVNKYPNVAVQAKQPKXXXXXXXXXXXDSS-----------------FDNL 144
           MGVPSFY+WLV KYPN+ V AK+              SS                 + NL
Sbjct: 1   MGVPSFYKWLVGKYPNIVVPAKEDDELLAGAGSTSSSSSSPPGDEQTQAAGGPNGVYHNL 60

Query: 143 YLDMNGIIHPCFHPDDQ-DPPTTFDEVFQIIFEYIDWLFKIVRPKKLL 3
           YLDMNGIIHPCFHP+DQ  PPTTFDEVF  +F+YID LF+IVRP KLL
Sbjct: 61  YLDMNGIIHPCFHPEDQVYPPTTFDEVFAAMFDYIDRLFRIVRPTKLL 108


>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
          Length = 1065

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 8/98 (8%)
 Frame = -1

Query: 272 MGVPSFYRWLVNKYPNVAVQAKQPKXXXXXXXXXXXDSS--------FDNLYLDMNGIIH 117
           MGVP+FYRWL  KYP V V   + +           D+S        +DNLYLDMNGIIH
Sbjct: 1   MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60

Query: 116 PCFHPDDQDPPTTFDEVFQIIFEYIDWLFKIVRPKKLL 3
           PCFHP+D+  PTTFDEVFQ +F+YID LF +VRP+KLL
Sbjct: 61  PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLL 98