BLASTX nr result

ID: Cimicifuga21_contig00037173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037173
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308233.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
gb|AEE00746.1| lectin receptor-like kinase [Gossypium hirsutum]       160   1e-37
ref|XP_002323017.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37
ref|XP_002336804.1| predicted protein [Populus trichocarpa] gi|2...   157   9e-37
ref|XP_002323018.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36

>ref|XP_002308233.1| predicted protein [Populus trichocarpa] gi|222854209|gb|EEE91756.1|
           predicted protein [Populus trichocarpa]
          Length = 660

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/107 (73%), Positives = 92/107 (85%), Gaps = 1/107 (0%)
 Frame = -2

Query: 320 KDLYIGTKGFNESEIIGVGGFGAVYKGVLATTGEQIAVKRISHNSVQGVREFVAEIESLG 141
           +DLY  TKGF +SEIIGVGGFGAVYKG L T G ++AVK+I++NS+QG+REF AEIESLG
Sbjct: 329 QDLYTATKGFKKSEIIGVGGFGAVYKGRLPTNGNEVAVKKINNNSIQGLREFTAEIESLG 388

Query: 140 RLRHKNLVHLLGWCKRNNDLLLVYDFVPNGSL-DLFLRRKDNFVLSW 3
           RLRHKNLV+L GWCK+NNDLLLVYDF+PNGSL  L   R +NFVLSW
Sbjct: 389 RLRHKNLVNLQGWCKKNNDLLLVYDFIPNGSLAGLLFSRINNFVLSW 435


>gb|AEE00746.1| lectin receptor-like kinase [Gossypium hirsutum]
          Length = 668

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/107 (71%), Positives = 90/107 (84%), Gaps = 1/107 (0%)
 Frame = -2

Query: 320 KDLYIGTKGFNESEIIGVGGFGAVYKGVLATTGEQIAVKRISHNSVQGVREFVAEIESLG 141
           KDLY  T+GF  SEIIGVGGF AVYKGVL TTG ++AVK+I+ +S+QG+REFVAEIESLG
Sbjct: 337 KDLYAATRGFQLSEIIGVGGFAAVYKGVLPTTGTEVAVKKITQSSIQGLREFVAEIESLG 396

Query: 140 RLRHKNLVHLLGWCKRNNDLLLVYDFVPNGSL-DLFLRRKDNFVLSW 3
           RLRHKNLV+L GWCKR NDLLLVYD++PNGSL  L   ++  FVLSW
Sbjct: 397 RLRHKNLVYLQGWCKRKNDLLLVYDYIPNGSLYSLLFNQEQGFVLSW 443


>ref|XP_002323017.1| predicted protein [Populus trichocarpa] gi|222867647|gb|EEF04778.1|
           predicted protein [Populus trichocarpa]
          Length = 660

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/107 (71%), Positives = 89/107 (83%), Gaps = 1/107 (0%)
 Frame = -2

Query: 320 KDLYIGTKGFNESEIIGVGGFGAVYKGVLATTGEQIAVKRISHNSVQGVREFVAEIESLG 141
           +DL+  TKGF +SEIIG GGFGAVYKG L T G ++AVKRI+ NS+QG+R F AEIESLG
Sbjct: 343 QDLHTATKGFKKSEIIGAGGFGAVYKGRLPTNGNEVAVKRITTNSIQGLRGFTAEIESLG 402

Query: 140 RLRHKNLVHLLGWCKRNNDLLLVYDFVPNGSL-DLFLRRKDNFVLSW 3
           RLRHKNLV+L GWCKRNNDLLLVYD++PNGSL  L   R +NFVLSW
Sbjct: 403 RLRHKNLVNLQGWCKRNNDLLLVYDYIPNGSLAGLLFSRGNNFVLSW 449


>ref|XP_002336804.1| predicted protein [Populus trichocarpa] gi|222836934|gb|EEE75327.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score =  157 bits (397), Expect = 9e-37
 Identities = 76/107 (71%), Positives = 89/107 (83%), Gaps = 1/107 (0%)
 Frame = -2

Query: 320 KDLYIGTKGFNESEIIGVGGFGAVYKGVLATTGEQIAVKRISHNSVQGVREFVAEIESLG 141
           +DL+  TKGF +SEIIG GGFGAVYKG L T G ++AVKRI+ NS+QG+R F AEIESLG
Sbjct: 206 QDLHTATKGFKKSEIIGAGGFGAVYKGRLPTNGNEVAVKRITTNSIQGLRGFTAEIESLG 265

Query: 140 RLRHKNLVHLLGWCKRNNDLLLVYDFVPNGSL-DLFLRRKDNFVLSW 3
           RLRHKNLV+L GWCKRNNDLL+VYD++PNGSL  L   R +NFVLSW
Sbjct: 266 RLRHKNLVNLQGWCKRNNDLLVVYDYIPNGSLAGLLFSRGNNFVLSW 312


>ref|XP_002323018.1| predicted protein [Populus trichocarpa] gi|222867648|gb|EEF04779.1|
           predicted protein [Populus trichocarpa]
          Length = 660

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/107 (71%), Positives = 88/107 (82%), Gaps = 1/107 (0%)
 Frame = -2

Query: 320 KDLYIGTKGFNESEIIGVGGFGAVYKGVLATTGEQIAVKRISHNSVQGVREFVAEIESLG 141
           +DL+  TKGF +SEIIG GGFGAVYKG L T G ++AVKRI+ NS+QG+R F AEIESLG
Sbjct: 343 QDLHTATKGFKKSEIIGAGGFGAVYKGRLPTNGNEVAVKRITPNSIQGLRGFTAEIESLG 402

Query: 140 RLRHKNLVHLLGWCKRNNDLLLVYDFVPNGSL-DLFLRRKDNFVLSW 3
           RLRHKNLV+L GWCKRNNDLLLVYD++PNG L  L   R +NFVLSW
Sbjct: 403 RLRHKNLVNLQGWCKRNNDLLLVYDYIPNGCLAGLLFSRGNNFVLSW 449


Top