BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037124
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523507.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_003604017.1| Pentatricopeptide repeat-containing protein ...   144   1e-32
ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containi...   113   1e-23
ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   111   7e-23
ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago ...    76   2e-12

>ref|XP_003523507.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 472

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/139 (51%), Positives = 95/139 (68%), Gaps = 1/139 (0%)
 Frame = +3

Query: 12  SLVDLLHLCIQTRNLRATKTLHTHLLRTGLVFSCLNLHTKLILSYATCFPNN-FQTITIF 188
           ++ + LH    + N+ A K LH  LLRTG++F   NLHT+LI +YA C PNN  Q++  F
Sbjct: 5   NVFEFLHQSRGSGNVSAIKKLHAQLLRTGMLFLSHNLHTQLIATYAACLPNNNLQSLNNF 64

Query: 189 FNSMNLTNSLPFNTILSNFSRNGPPFLALRTLSFMHSNGVPLDSYSLCSSLKASASTEST 368
           F  MN TN L FN I+S+F R G PFLAL + SF+H+NGVPLD+Y+LCS+L AS+  +  
Sbjct: 65  FKCMNSTNPLHFNAIISDFCRKGLPFLALASFSFVHANGVPLDTYALCSTLTASSKVKDL 124

Query: 369 KFGKQIHTHVTKLGFTSKI 425
             GKQIH HV K G++S +
Sbjct: 125 NLGKQIHAHVAKSGWSSSV 143


>ref|XP_003604017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493065|gb|AES74268.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 742

 Score =  144 bits (362), Expect = 1e-32
 Identities = 74/139 (53%), Positives = 94/139 (67%), Gaps = 2/139 (1%)
 Frame = +3

Query: 15  LVDLLHLCIQTRNLRATKTLHTHLLRTGLVFSCLNLHTKLILSYATCFP-NNFQTIT-IF 188
           ++  LH C  T NL + K LH HLL  G +F   +LHT+LI +Y + FP NN QT+T  F
Sbjct: 194 IIQYLHQCQVTNNLSSIKKLHAHLLTKGTLFILHDLHTQLISTYTSFFPSNNLQTLTNSF 253

Query: 189 FNSMNLTNSLPFNTILSNFSRNGPPFLALRTLSFMHSNGVPLDSYSLCSSLKASASTEST 368
           F  MN TN L FN I+S+F R G PFLAL T SFMH+N VPLD+Y+LCS+L AS+  +  
Sbjct: 254 FKCMNSTNPLHFNVIISHFCRKGFPFLALTTFSFMHTNHVPLDTYALCSTLTASSKFKDV 313

Query: 369 KFGKQIHTHVTKLGFTSKI 425
            FGKQIH HV K G++S +
Sbjct: 314 NFGKQIHAHVEKSGWSSSV 332


>ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 469

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/139 (43%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
 Frame = +3

Query: 12  SLVDLLHLCIQTRNLRATKTLHTHLLRTGLVFSCLNLHTKLILSYATCFPN-NFQTITIF 188
           S     H   Q +NL+  K +H HLLRT   F   NLH+KLILSY+   PN + +++   
Sbjct: 8   SFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKSLNGI 67

Query: 189 FNSMNLTNSLPFNTILSNFSRNGPPFLALRTLSFMHSNGVPLDSYSLCSSLKASASTEST 368
           F  +    SL FN ++S+FSR+G    AL   SFMHSNGVP+D+Y+LCSSL   +  ++ 
Sbjct: 68  FQCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQNV 127

Query: 369 KFGKQIHTHVTKLGFTSKI 425
            +GKQIH  V K G+   +
Sbjct: 128 VYGKQIHAFVGKSGWLCSV 146


>ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g18750, chloroplastic-like [Cucumis sativus]
          Length = 497

 Score =  111 bits (277), Expect = 7e-23
 Identities = 60/139 (43%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
 Frame = +3

Query: 12  SLVDLLHLCIQTRNLRATKTLHTHLLRTGLVFSCLNLHTKLILSYATCFPN-NFQTITIF 188
           S     H   Q +NL+  K +H HLLRT   F   NLH+KLILSY+   PN + +++   
Sbjct: 36  SFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKSLNGI 95

Query: 189 FNSMNLTNSLPFNTILSNFSRNGPPFLALRTLSFMHSNGVPLDSYSLCSSLKASASTEST 368
           F  +    SL FN ++S+FSR+G    AL   SFMHSNGVP+D+Y+LCSSL   +     
Sbjct: 96  FQCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSLFRXV 155

Query: 369 KFGKQIHTHVTKLGFTSKI 425
            +GKQIH  V K G+   +
Sbjct: 156 VYGKQIHAFVGKSGWLCSV 174


>ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
           gi|355515324|gb|AES96947.1| hypothetical protein
           MTR_5g043450 [Medicago truncatula]
          Length = 828

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 44/134 (32%), Positives = 77/134 (57%)
 Frame = +3

Query: 12  SLVDLLHLCIQTRNLRATKTLHTHLLRTGLVFSCLNLHTKLILSYATCFPNNFQTITIFF 191
           +++ +L+ C +   L+  K++H  +LR  +  + L+L   LI  Y+ C+     +     
Sbjct: 306 TMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACW--KMSSCEKLL 363

Query: 192 NSMNLTNSLPFNTILSNFSRNGPPFLALRTLSFMHSNGVPLDSYSLCSSLKASASTESTK 371
           +S+   N + +NT++S ++R G    A+   + M + G+  DS+SL SS+ ASAS+ S +
Sbjct: 364 HSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQ 423

Query: 372 FGKQIHTHVTKLGF 413
           FG+QIH HV K GF
Sbjct: 424 FGQQIHGHVMKRGF 437