BLASTX nr result

ID: Cimicifuga21_contig00037123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037123
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB77197.1| male sterility protein 2, partial [Lycium barbarum]    126   2e-27
ref|XP_002323348.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
gb|AAZ06658.1| male sterility protein 2-2 [Brassica napus] gi|70...   125   4e-27
gb|AAQ81302.2| male sterility protein 2-1 mutant [Brassica napus]     125   4e-27
emb|CAA68190.1| male sterility protein 2 [Brassica napus] gi|324...   125   4e-27

>gb|AFB77197.1| male sterility protein 2, partial [Lycium barbarum]
          Length = 526

 Score =  126 bits (317), Expect = 2e-27
 Identities = 55/87 (63%), Positives = 74/87 (85%)
 Frame = -3

Query: 262 DAREDCQDNIVSKKMKDLGTERAKIYGWQNTYVFTKAMGEMMIESEREDIPIVIIRPSAI 83
           D+++  +DN V++KMK++G +RA  +GWQ+TYVFTKAMGEMMI++ R DIP+VIIRPS I
Sbjct: 234 DSKQALEDNSVAQKMKEIGLQRANKFGWQDTYVFTKAMGEMMIDTMRSDIPVVIIRPSVI 293

Query: 82  ESTYIEPIPGWIEGIRMLDPILVYYAK 2
           ESTY EP PGW+EG RM+DPI+++Y K
Sbjct: 294 ESTYREPFPGWMEGNRMMDPIILHYGK 320


>ref|XP_002323348.1| predicted protein [Populus trichocarpa] gi|222867978|gb|EEF05109.1|
           predicted protein [Populus trichocarpa]
          Length = 610

 Score =  126 bits (316), Expect = 2e-27
 Identities = 57/87 (65%), Positives = 74/87 (85%)
 Frame = -3

Query: 262 DAREDCQDNIVSKKMKDLGTERAKIYGWQNTYVFTKAMGEMMIESEREDIPIVIIRPSAI 83
           D++E  Q+N V++KMK+LG ERA+ YGWQ+TYVFTKAMGEM++++ R DIP+VIIRPS I
Sbjct: 321 DSKEAFQENEVAQKMKELGLERARKYGWQDTYVFTKAMGEMVVDNMRGDIPVVIIRPSVI 380

Query: 82  ESTYIEPIPGWIEGIRMLDPILVYYAK 2
           EST  EP PGW+EG RM+DPI++YY K
Sbjct: 381 ESTCKEPFPGWMEGNRMMDPIVLYYGK 407


>gb|AAZ06658.1| male sterility protein 2-2 [Brassica napus]
           gi|70672848|gb|AAZ06659.1| male sterility protein 2-2
           [Brassica napus]
          Length = 616

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/86 (67%), Positives = 70/86 (81%)
 Frame = -3

Query: 259 AREDCQDNIVSKKMKDLGTERAKIYGWQNTYVFTKAMGEMMIESEREDIPIVIIRPSAIE 80
           AR+  QD   ++KMKDLG ERA+ YGWQ+TYVFTKAMGEMMI S R D+P+VIIRPS IE
Sbjct: 327 ARKGTQDQDEAQKMKDLGLERARSYGWQDTYVFTKAMGEMMINSTRGDVPVVIIRPSVIE 386

Query: 79  STYIEPIPGWIEGIRMLDPILVYYAK 2
           STY +P PGW+EG RM+DPI++ Y K
Sbjct: 387 STYKDPFPGWMEGNRMMDPIVLCYGK 412


>gb|AAQ81302.2| male sterility protein 2-1 mutant [Brassica napus]
          Length = 616

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/86 (67%), Positives = 70/86 (81%)
 Frame = -3

Query: 259 AREDCQDNIVSKKMKDLGTERAKIYGWQNTYVFTKAMGEMMIESEREDIPIVIIRPSAIE 80
           AR+  QD   ++KMKDLG ERA+ YGWQ+TYVFTKAMGEMMI S R D+P+VIIRPS IE
Sbjct: 327 ARKGTQDQDEAQKMKDLGLERARSYGWQDTYVFTKAMGEMMINSTRGDVPVVIIRPSVIE 386

Query: 79  STYIEPIPGWIEGIRMLDPILVYYAK 2
           STY +P PGW+EG RM+DPI++ Y K
Sbjct: 387 STYKDPFPGWMEGNRMMDPIVLCYGK 412


>emb|CAA68190.1| male sterility protein 2 [Brassica napus]
           gi|32441492|gb|AAP81865.1| male sterility protein 2
           [Brassica napus]
          Length = 616

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/86 (67%), Positives = 70/86 (81%)
 Frame = -3

Query: 259 AREDCQDNIVSKKMKDLGTERAKIYGWQNTYVFTKAMGEMMIESEREDIPIVIIRPSAIE 80
           AR+  QD   ++KMKDLG ERA+ YGWQ+TYVFTKAMGEMMI S R D+P+VIIRPS IE
Sbjct: 327 ARKGTQDQDEAQKMKDLGLERARSYGWQDTYVFTKAMGEMMINSTRGDVPVVIIRPSVIE 386

Query: 79  STYIEPIPGWIEGIRMLDPILVYYAK 2
           STY +P PGW+EG RM+DPI++ Y K
Sbjct: 387 STYKDPFPGWMEGNRMMDPIVLCYGK 412


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