BLASTX nr result

ID: Cimicifuga21_contig00037113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037113
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302387.1| AP2 domain-containing transcription factor [...    80   2e-13
ref|XP_002285467.2| PREDICTED: AP2-like ethylene-responsive tran...    79   5e-13
emb|CAN60401.1| hypothetical protein VITISV_034131 [Vitis vinifera]    79   5e-13
ref|XP_002307311.1| AP2 domain-containing transcription factor [...    71   8e-11
ref|XP_002263597.2| PREDICTED: AP2-like ethylene-responsive tran...    68   7e-10

>ref|XP_002302387.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222844113|gb|EEE81660.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 637

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 50/127 (39%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
 Frame = +3

Query: 3   MYQSSPQKPSDMAKLLDQKSNGIDNYRNPVFSVALRDLIE-HHTTNSD**VVYKSVILGV 179
           +YQSS + P+   + LDQKS    NYR+  FSVAL+DLI   H+ NS   VV +S  LG 
Sbjct: 505 LYQSSQEPPNACGESLDQKSMSSGNYRSSSFSVALQDLIGIDHSVNSSQLVVDESAKLGT 564

Query: 180 QLFNAXXXXXXXXXXXXXXXDKNGLSTLFASSTPASKLINLATSINSWIPSTQLKPAS-S 356
            L N                DK   + LFA    ASK ++  TS+  W  + QL+PA+  
Sbjct: 565 LLSNPSSLVTSLSSSREPSPDKTATTMLFAKPPLASKFVSPTTSVTPWFQAAQLRPAAIP 624

Query: 357 MQHMPMF 377
           M H+P+F
Sbjct: 625 MSHLPVF 631


>ref|XP_002285467.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           ANT-like [Vitis vinifera]
          Length = 674

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
 Frame = +3

Query: 3   MYQSSPQKPSDMAKLLDQKSNGIDNYRNPVFSVALRDLIEHHTTNSD**VVYKSVILGVQ 182
           +YQS  Q+PS   + L+QK   I  YR   FS+AL+DLI   + N+   +  +S  LG  
Sbjct: 543 LYQSPQQQPSSCVESLEQKPMSIGGYRTTSFSMALQDLIGIDSVNTSQPIGDESTKLGTH 602

Query: 183 LFNAXXXXXXXXXXXXXXXDKNGLSTLFASSTPASKLINLATSINSWIPSTQLKPAS-SM 359
             N                DK G + LFA    ASKL+  A++++SWIP++QL+ A+ SM
Sbjct: 603 FSNPSSLVTSLSSSREASPDKTGPAMLFAKPPLASKLMGPASALSSWIPTSQLRTAAVSM 662

Query: 360 QHMPMF 377
            H+P+F
Sbjct: 663 AHLPLF 668


>emb|CAN60401.1| hypothetical protein VITISV_034131 [Vitis vinifera]
          Length = 629

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
 Frame = +3

Query: 3   MYQSSPQKPSDMAKLLDQKSNGIDNYRNPVFSVALRDLIEHHTTNSD**VVYKSVILGVQ 182
           +YQS  Q+PS   + L+QK   I  YR   FS+AL+DLI   + N+   +  +S  LG  
Sbjct: 498 LYQSPQQQPSSCVESLEQKPMSIGGYRTTSFSMALQDLIGIDSVNTSQPIGDESTKLGTH 557

Query: 183 LFNAXXXXXXXXXXXXXXXDKNGLSTLFASSTPASKLINLATSINSWIPSTQLKPAS-SM 359
             N                DK G + LFA    ASKL+  A++++SWIP++QL+ A+ SM
Sbjct: 558 FSNPSSLVTSLSSSREASPDKTGPAMLFAKPPLASKLMGPASALSSWIPTSQLRTAAVSM 617

Query: 360 QHMPMF 377
            H+P+F
Sbjct: 618 AHLPLF 623


>ref|XP_002307311.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222856760|gb|EEE94307.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 639

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 50/129 (38%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
 Frame = +3

Query: 3   MYQSSPQKPSDMAKLLDQKSNGIDNYRNPVFSVALRDLIE-HHTTNSD**VVYKSVIL-G 176
           +YQS  ++P+   + L+QKS    NYR+  FSVA++DL+   H+ NS   VV +S  L G
Sbjct: 505 LYQSPQEQPNASGESLNQKSMSAGNYRSTSFSVAVQDLMGIDHSVNSSQPVVDESAKLGG 564

Query: 177 VQLFNAXXXXXXXXXXXXXXXDKNGLSTLFASSTPASKLINLATSINSWI-PSTQLKPAS 353
             L N                DK G   LFA    ASK I   TS+  WI  + QL+PA 
Sbjct: 565 THLSNPSSLVTSLSSSREASPDKTGTPVLFAKPPRASKFIGPTTSVTPWIQAAAQLRPAG 624

Query: 354 -SMQHMPMF 377
            SM H+P+F
Sbjct: 625 ISMAHLPVF 633


>ref|XP_002263597.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           ANT-like [Vitis vinifera]
          Length = 653

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 48/126 (38%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
 Frame = +3

Query: 3   MYQSSPQKPSDMAKLLDQKSNGIDNYRNPVFSVALRDLIEHHTTNSD**VVYKSVILGVQ 182
           +YQSS Q  S + K LDQK    D+YR P F VA  +L+              S  +G  
Sbjct: 523 LYQSSQQSNSCL-KQLDQKPLSFDHYRAPSFPVAPHNLMGMDAMGPAQQEAEDSAKMGTH 581

Query: 183 LFNAXXXXXXXXXXXXXXXDKNGLSTLFASSTPASKLINL-ATSINSWIPSTQLKPASSM 359
           L NA               DK  L  LFA    A K     A ++NSWIPS QL+PA  M
Sbjct: 582 LSNASSLVTSLSSSREGSPDKTSLPMLFAIPPSAPKFFATPANTVNSWIPSAQLRPAIPM 641

Query: 360 QHMPMF 377
            HMP+F
Sbjct: 642 PHMPVF 647


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