BLASTX nr result

ID: Cimicifuga21_contig00037088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037088
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263942.2| PREDICTED: MORC family CW-type zinc finger p...   155   4e-36
emb|CBI37505.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|NP_001058096.1| Os06g0622000 [Oryza sativa Japonica Group] g...   150   1e-34
gb|EEE66033.1| hypothetical protein OsJ_22008 [Oryza sativa Japo...   150   1e-34
ref|XP_002532483.1| zinc finger protein, putative [Ricinus commu...   146   2e-33

>ref|XP_002263942.2| PREDICTED: MORC family CW-type zinc finger protein 2B-like [Vitis
           vinifera]
          Length = 760

 Score =  155 bits (391), Expect = 4e-36
 Identities = 80/135 (59%), Positives = 97/135 (71%), Gaps = 6/135 (4%)
 Frame = +3

Query: 3   QSLNESKDMLEIPIVSYRTEGPVMEFDTSVQTKATAEHNLQVIKNFSRFNEYFIG---GL 173
           QSLNE KD LEIPIVSY  +G  ME D S+Q++A A++NL+ I+ FS FN+Y IG   GL
Sbjct: 362 QSLNEGKDNLEIPIVSYYRQGQFMELDESIQSEAFAKYNLKAIREFSPFNKYSIGMKAGL 421

Query: 174 FANKGAGTQIYIWNLDEWGSNYSLEWEDGNATSS---ECDXXXXXXXXXXXPGQISQKVP 344
           F  KG GTQIYIWNLD+WGS+Y LEW +G ++ S   + D           PGQISQKVP
Sbjct: 422 FCEKGTGTQIYIWNLDKWGSDYCLEWHNGMSSGSSFYQGDIFIRSRRVKSRPGQISQKVP 481

Query: 345 IDYSLRSYLEVIFLD 389
           +DYSLRSYLEVIFL+
Sbjct: 482 LDYSLRSYLEVIFLN 496


>emb|CBI37505.3| unnamed protein product [Vitis vinifera]
          Length = 596

 Score =  155 bits (391), Expect = 4e-36
 Identities = 80/135 (59%), Positives = 97/135 (71%), Gaps = 6/135 (4%)
 Frame = +3

Query: 3   QSLNESKDMLEIPIVSYRTEGPVMEFDTSVQTKATAEHNLQVIKNFSRFNEYFIG---GL 173
           QSLNE KD LEIPIVSY  +G  ME D S+Q++A A++NL+ I+ FS FN+Y IG   GL
Sbjct: 219 QSLNEGKDNLEIPIVSYYRQGQFMELDESIQSEAFAKYNLKAIREFSPFNKYSIGMKAGL 278

Query: 174 FANKGAGTQIYIWNLDEWGSNYSLEWEDGNATSS---ECDXXXXXXXXXXXPGQISQKVP 344
           F  KG GTQIYIWNLD+WGS+Y LEW +G ++ S   + D           PGQISQKVP
Sbjct: 279 FCEKGTGTQIYIWNLDKWGSDYCLEWHNGMSSGSSFYQGDIFIRSRRVKSRPGQISQKVP 338

Query: 345 IDYSLRSYLEVIFLD 389
           +DYSLRSYLEVIFL+
Sbjct: 339 LDYSLRSYLEVIFLN 353


>ref|NP_001058096.1| Os06g0622000 [Oryza sativa Japonica Group]
           gi|51090841|dbj|BAD35369.1| Zinc finger CW-type
           coiled-coil domain protein 3-like [Oryza sativa Japonica
           Group] gi|113596136|dbj|BAF20010.1| Os06g0622000 [Oryza
           sativa Japonica Group]
          Length = 792

 Score =  150 bits (378), Expect = 1e-34
 Identities = 75/137 (54%), Positives = 92/137 (67%), Gaps = 8/137 (5%)
 Frame = +3

Query: 3   QSLNESKDMLEIPIVSYRTEGPVMEFDTSVQTKATAEHNLQVIKNFSRFNEYFIG---GL 173
           QS NE+KD LEIP+V+YR EG  ME D+SVQ++ATAE+NL  IK FS FNEYFIG   G+
Sbjct: 347 QSFNENKDNLEIPVVTYRKEGQYMEVDSSVQSEATAEYNLNAIKEFSPFNEYFIGEKLGI 406

Query: 174 FANKGAGTQIYIWNLDEWGSNYSLEWEDGNATSSEC-----DXXXXXXXXXXXPGQISQK 338
           F   G GTQIYIWNLD WG++Y+L+W  G  +         D           PGQ S  
Sbjct: 407 FGEDGTGTQIYIWNLDRWGADYTLDWSSGKPSEDPVHHGRGDILIRSRRVRLRPGQTSNN 466

Query: 339 VPIDYSLRSYLEVIFLD 389
           VP+DYSL+SYLEV+FL+
Sbjct: 467 VPLDYSLQSYLEVMFLN 483


>gb|EEE66033.1| hypothetical protein OsJ_22008 [Oryza sativa Japonica Group]
          Length = 800

 Score =  150 bits (378), Expect = 1e-34
 Identities = 75/137 (54%), Positives = 92/137 (67%), Gaps = 8/137 (5%)
 Frame = +3

Query: 3   QSLNESKDMLEIPIVSYRTEGPVMEFDTSVQTKATAEHNLQVIKNFSRFNEYFIG---GL 173
           QS NE+KD LEIP+V+YR EG  ME D+SVQ++ATAE+NL  IK FS FNEYFIG   G+
Sbjct: 347 QSFNENKDNLEIPVVTYRKEGQYMEVDSSVQSEATAEYNLNAIKEFSPFNEYFIGEKLGI 406

Query: 174 FANKGAGTQIYIWNLDEWGSNYSLEWEDGNATSSEC-----DXXXXXXXXXXXPGQISQK 338
           F   G GTQIYIWNLD WG++Y+L+W  G  +         D           PGQ S  
Sbjct: 407 FGEDGTGTQIYIWNLDRWGADYTLDWSSGKPSEDPVHHGRGDILIRSRRVRLRPGQTSNN 466

Query: 339 VPIDYSLRSYLEVIFLD 389
           VP+DYSL+SYLEV+FL+
Sbjct: 467 VPLDYSLQSYLEVMFLN 483


>ref|XP_002532483.1| zinc finger protein, putative [Ricinus communis]
           gi|223527808|gb|EEF29907.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 754

 Score =  146 bits (368), Expect = 2e-33
 Identities = 79/134 (58%), Positives = 93/134 (69%), Gaps = 6/134 (4%)
 Frame = +3

Query: 3   QSLNESKDMLEIPIVSYRTEGPVMEFDTSVQTKATAEHNLQVIKNFSRFNEYFIG---GL 173
           QSLNE  D LEIPIVSYR +G  ME DT+VQ++A A++NL+ IK  S F++Y IG   GL
Sbjct: 367 QSLNEGNDNLEIPIVSYRRKGQFMEVDTNVQSEALAKNNLKAIKELSHFDKYLIGEKAGL 426

Query: 174 FANKGAGTQIYIWNLDEWGSNYSLEWEDG-NATSS--ECDXXXXXXXXXXXPGQISQKVP 344
           F  K  GTQIYIWNLDEWGS Y L+W  G N  SS  + D           PGQ++QKVP
Sbjct: 427 FHGKHTGTQIYIWNLDEWGSGYCLDWTTGLNGWSSFHQGDILIRSKRVRSRPGQMTQKVP 486

Query: 345 IDYSLRSYLEVIFL 386
           +DYSLRSYLEVIFL
Sbjct: 487 LDYSLRSYLEVIFL 500


Top