BLASTX nr result

ID: Cimicifuga21_contig00037076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037076
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
emb|CBI24389.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29
gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich p...   126   2e-27
gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Ara...   126   2e-27

>ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial [Vitis vinifera]
          Length = 744

 Score =  140 bits (352), Expect = 1e-31
 Identities = 60/85 (70%), Positives = 75/85 (88%)
 Frame = -1

Query: 260 QLFRKIQNEGHEPNQITFLGVLSACAHVGLVKEGWDYFKSMRSLYGIEPGPDHYACMVDI 81
           +LF K+ NEG +PN+ITFLGVLSAC HVGL+++GW+YFKSM+SLY IEPGP HYAC+VD+
Sbjct: 586 ELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDL 645

Query: 80  LGRAGLLKEALDFIQSMPCKPHQGV 6
           LGRAG L +A+D I+SMPC+PH GV
Sbjct: 646 LGRAGFLDDAIDLIRSMPCEPHSGV 670


>emb|CBI24389.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  140 bits (352), Expect = 1e-31
 Identities = 60/85 (70%), Positives = 75/85 (88%)
 Frame = -1

Query: 260 QLFRKIQNEGHEPNQITFLGVLSACAHVGLVKEGWDYFKSMRSLYGIEPGPDHYACMVDI 81
           +LF K+ NEG +PN+ITFLGVLSAC HVGL+++GW+YFKSM+SLY IEPGP HYAC+VD+
Sbjct: 507 ELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDL 566

Query: 80  LGRAGLLKEALDFIQSMPCKPHQGV 6
           LGRAG L +A+D I+SMPC+PH GV
Sbjct: 567 LGRAGFLDDAIDLIRSMPCEPHSGV 591


>ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial-like [Glycine max]
          Length = 713

 Score =  133 bits (334), Expect = 2e-29
 Identities = 59/84 (70%), Positives = 70/84 (83%)
 Frame = -1

Query: 257 LFRKIQNEGHEPNQITFLGVLSACAHVGLVKEGWDYFKSMRSLYGIEPGPDHYACMVDIL 78
           +++K+Q+EGHEPN +TFL VLSAC H GLV EGW+ F +M+S YGIEP  DHYACMVDIL
Sbjct: 517 IYKKMQSEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYACMVDIL 576

Query: 77  GRAGLLKEALDFIQSMPCKPHQGV 6
           GRAGLL EA+D I+SMP KPH GV
Sbjct: 577 GRAGLLDEAIDLIRSMPFKPHSGV 600


>gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
           gb|AF151215 and contains multiple PPR PF|01535 repeats
           [Arabidopsis thaliana]
          Length = 816

 Score =  126 bits (316), Expect = 2e-27
 Identities = 55/85 (64%), Positives = 67/85 (78%)
 Frame = -1

Query: 260 QLFRKIQNEGHEPNQITFLGVLSACAHVGLVKEGWDYFKSMRSLYGIEPGPDHYACMVDI 81
           +LF  +++ G EPN +TFL +LSAC HVG V  GW YFKSM+S Y IEPGPDHYACMVD+
Sbjct: 525 KLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDL 584

Query: 80  LGRAGLLKEALDFIQSMPCKPHQGV 6
           LGR+GLL +A + I +MPCKPH GV
Sbjct: 585 LGRSGLLDDASNLISTMPCKPHSGV 609


>gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana]
          Length = 839

 Score =  126 bits (316), Expect = 2e-27
 Identities = 55/85 (64%), Positives = 67/85 (78%)
 Frame = -1

Query: 260 QLFRKIQNEGHEPNQITFLGVLSACAHVGLVKEGWDYFKSMRSLYGIEPGPDHYACMVDI 81
           +LF  +++ G EPN +TFL +LSAC HVG V  GW YFKSM+S Y IEPGPDHYACMVD+
Sbjct: 525 KLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDL 584

Query: 80  LGRAGLLKEALDFIQSMPCKPHQGV 6
           LGR+GLL +A + I +MPCKPH GV
Sbjct: 585 LGRSGLLDDASNLISTMPCKPHSGV 609


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