BLASTX nr result
ID: Cimicifuga21_contig00037076
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00037076 (260 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containi... 140 1e-31 emb|CBI24389.3| unnamed protein product [Vitis vinifera] 140 1e-31 ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29 gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich p... 126 2e-27 gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Ara... 126 2e-27 >ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600, mitochondrial [Vitis vinifera] Length = 744 Score = 140 bits (352), Expect = 1e-31 Identities = 60/85 (70%), Positives = 75/85 (88%) Frame = -1 Query: 260 QLFRKIQNEGHEPNQITFLGVLSACAHVGLVKEGWDYFKSMRSLYGIEPGPDHYACMVDI 81 +LF K+ NEG +PN+ITFLGVLSAC HVGL+++GW+YFKSM+SLY IEPGP HYAC+VD+ Sbjct: 586 ELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDL 645 Query: 80 LGRAGLLKEALDFIQSMPCKPHQGV 6 LGRAG L +A+D I+SMPC+PH GV Sbjct: 646 LGRAGFLDDAIDLIRSMPCEPHSGV 670 >emb|CBI24389.3| unnamed protein product [Vitis vinifera] Length = 665 Score = 140 bits (352), Expect = 1e-31 Identities = 60/85 (70%), Positives = 75/85 (88%) Frame = -1 Query: 260 QLFRKIQNEGHEPNQITFLGVLSACAHVGLVKEGWDYFKSMRSLYGIEPGPDHYACMVDI 81 +LF K+ NEG +PN+ITFLGVLSAC HVGL+++GW+YFKSM+SLY IEPGP HYAC+VD+ Sbjct: 507 ELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDL 566 Query: 80 LGRAGLLKEALDFIQSMPCKPHQGV 6 LGRAG L +A+D I+SMPC+PH GV Sbjct: 567 LGRAGFLDDAIDLIRSMPCEPHSGV 591 >ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600, mitochondrial-like [Glycine max] Length = 713 Score = 133 bits (334), Expect = 2e-29 Identities = 59/84 (70%), Positives = 70/84 (83%) Frame = -1 Query: 257 LFRKIQNEGHEPNQITFLGVLSACAHVGLVKEGWDYFKSMRSLYGIEPGPDHYACMVDIL 78 +++K+Q+EGHEPN +TFL VLSAC H GLV EGW+ F +M+S YGIEP DHYACMVDIL Sbjct: 517 IYKKMQSEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYACMVDIL 576 Query: 77 GRAGLLKEALDFIQSMPCKPHQGV 6 GRAGLL EA+D I+SMP KPH GV Sbjct: 577 GRAGLLDEAIDLIRSMPFKPHSGV 600 >gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca gb|AF151215 and contains multiple PPR PF|01535 repeats [Arabidopsis thaliana] Length = 816 Score = 126 bits (316), Expect = 2e-27 Identities = 55/85 (64%), Positives = 67/85 (78%) Frame = -1 Query: 260 QLFRKIQNEGHEPNQITFLGVLSACAHVGLVKEGWDYFKSMRSLYGIEPGPDHYACMVDI 81 +LF +++ G EPN +TFL +LSAC HVG V GW YFKSM+S Y IEPGPDHYACMVD+ Sbjct: 525 KLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDL 584 Query: 80 LGRAGLLKEALDFIQSMPCKPHQGV 6 LGR+GLL +A + I +MPCKPH GV Sbjct: 585 LGRSGLLDDASNLISTMPCKPHSGV 609 >gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana] Length = 839 Score = 126 bits (316), Expect = 2e-27 Identities = 55/85 (64%), Positives = 67/85 (78%) Frame = -1 Query: 260 QLFRKIQNEGHEPNQITFLGVLSACAHVGLVKEGWDYFKSMRSLYGIEPGPDHYACMVDI 81 +LF +++ G EPN +TFL +LSAC HVG V GW YFKSM+S Y IEPGPDHYACMVD+ Sbjct: 525 KLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDL 584 Query: 80 LGRAGLLKEALDFIQSMPCKPHQGV 6 LGR+GLL +A + I +MPCKPH GV Sbjct: 585 LGRSGLLDDASNLISTMPCKPHSGV 609